| Protein: | gi|50948369, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 645 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50948369, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
921.0 | [0..1] | [645..14] |
|
Region A: Residues: [1-645] |
1 11 21 31 41 51
| | | | | |
1 MGHPPATSPA GATAGVSVKV SDRYVEIKNG IFELTLSNPD GIVTGVRYNG VDNLMEILNK 60
61 EDNRGYWDLV WSKLGERTGI FDVIKGTEFR IIYQDENHAE VSFVRTWDPS LEGKAVPLNI 120
121 DKRFIVLRGC SGFYTYGIYE HQEGWPGFSL GETRVAFKLR KDKFHYMALA DDRQRIMPMP 180
181 EDRVPPRGQQ LAYPEAVLLV DPINPDLRGE VDDKYQYSCE DQYNNVHGWI SFDPPIGFWQ 240
241 ITPSDEFRTG GPVKQNLTSH VGPTMLAMFL SGHYAGDDLT PKFLTGEYWK KVHGPVFMYL 300
301 NSSWDGSDPT LLWEDAKVQM MIEKESWPYC FALSDDFQKT EQRGCISGRL LVRDRYLDDA 360
361 DLYATSAYVG LALPGDVGSW QRECKGYQFW CRAEDDGSFC IRNIVAGDYN LYAWVPGFIG 420
421 DYKLDAKLTI SSGDDIYLGD LVYEPPRDGP TMWEIGIPDR SASEFFVPDP NPNYVNRLYI 480
481 NHPDRFRQYG LWERYAELYP DGDLVYTIGQ SDYTTDWFFA QVNRRTDQST YQPTTWQIKF 540
541 NLDSVSPNST YKFRVALASS ANAELQVRFN DQDRTAPHFT TGLIGKDNTI ARHGIHGLYW 600
601 LFNIDVSGAW LVQGMNTIYL KQPRNQSPFQ GLMYDYLRME GPSGS
|
| Detection Method: |  |
| Confidence: | 132.0 |
| Match: | 1nkgA |
| Description: | Rhamnogalacturonan lyase from Aspergillus aculeatus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.24087518312023 | bayes_pls_golite062009 |
