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Protein Overview: gi|42407806, gi|...

General Information:
Name(s) found: gi|50948275 [NCBI NR]
gi|42407806 [NCBI NR]
gi|125569426 [NCBI NR]
gi|115477685 [NCBI NR]
gi|113624407 [NCBI NR]
Description(s) found:
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  • gi|50948275|ref|XP_483665.1| typical P-type R2R3 Myb protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42407806|dbj|BAD08950.1| typical P-type R2R3 Myb protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125569426|gb|EAZ10941.1| hypothetical protein OsJ_00784 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477685|ref|NP_001062438.1| Os08g0549000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624407|dbj|BAF24352.1| Os08g0549000 [Oryza sativa Japonica Group] [NCBI NR]
  • typical P-type R2R3 Myb protein [Oryza sativa (japonica cultivar-group)]gi|42407806|dbj|BAD08950.1| typical P-type R2R3 Myb protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os08g0549000 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • typical P-type R2R3 Myb protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCEKE HTNKGAWTKE EDERLVAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
   61 LRPDLKRGNF TADEDDLIIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIRRKLLGRG 120
  121 IDPVTHRPVN AAAATISFHP QPPPTTKEEQ LILSKPPKCP DLNLDLCISP PSCQEEDDDY 180
  181 EAKPAMIVRA PELQRRRGGL CFGCSLGLQK ECKCSGGGAG AGAGNNFLGL RAGMLDFRSL 240
  241 PMK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 36.045757 c-Myb, DNA-binding domain
    2 View Details [119..243] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle