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Protein Overview: gi|215768081, gi...

General Information:
Name(s) found: gi|51964956 [NCBI NR]
gi|50946627 [NCBI NR]
gi|42409426 [NCBI NR]
gi|215768081 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|51964956|ref|XP_507262.1| PREDICTED P0104B02.16-1 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50946627|ref|XP_482841.1| putative glutamate decarboxylase [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42409426|dbj|BAD10771.1| putative glutamate decarboxylase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215768081|dbj|BAH00310.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 497 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSHASSGR DDAVRCTFAT RYACETLPRF RMPEQSIPRE AAYQIINDEL MLDGNPRLNL  60
   61 ASFVTTWMEP ECDKLIMDSV NKNYVDMDEY PVTTELQNRC VNMIAHLFNA PIKEDETAIG 120
  121 VGTVGSSEAI MLAGLAFKRK WQNKRKEQGK PCDKPNIVTG ANVQVCWEKF ARYFEVELKE 180
  181 VKLSEGYYVM DPVKAVEMVD ENTICVAAIL GSTLTGEFED VKLLNNLLTE KNKETGWDVP 240
  241 IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVIW RSKEDLPEEL 300
  301 IFHINYLGTD QPTFTLNFSK GSSQIIAQYY QLIRLGFEGY KNIMQNCMEN TAILREGIEA 360
  361 TGRFEILSKE AGVPLVAFSL KDSGRYTVFD ISEHLRRFGW IVPAYTMPAN AEHVAVLRVV 420
  421 IREDFSRSLA ERLVSDIVKI LHELDAHSAQ VLKISSAIAK QQSGDDGVVT KKSVLETERE 480
  481 IFAYWRDQVK KKQTGIC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..497] PSI-BLAST 72.045757 Crystal structure of Escherichia coli GadB (low pH)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • glutamate decarboxylase activity
    		•  1.34215658716536 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.05524734914785 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.05524734914785 bayes_pls_golite062009
  • binding
    		•  0.252160165096264 bayes_pls_golite062009
  • N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
    		•  0.223759435414525 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.13686553668007 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle