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Protein Overview: gi|125603515, gi...

General Information:
Name(s) found: gi|50946039 [NCBI NR]
gi|42409479 [NCBI NR]
gi|27125807 [NCBI NR]
gi|125603515 [NCBI NR]
gi|115476556 [NCBI NR]
gi|113623843 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|50946039|ref|XP_482547.1| MYB27 protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42409479|dbj|BAD09835.1| MYB27 protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|27125807|emb|CAD44619.1| MYB27 protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125603515|gb|EAZ42840.1| hypothetical protein OsJ_27428 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115476556|ref|NP_001061874.1| Os08g0433400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623843|dbj|BAF23788.1| Os08g0433400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCEKI GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY  60
   61 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120
  121 IDPVTHKAIN GTLNNTAGDK SAKVTASLSH MAQWESARLE AEARLARESK MRIAASTPSK 180
  181 LHAQSTNPPA STPSPCFDVL NAWQSAKIDL ESPTSTLTFA GSNASMLPFS TTTALELSES 240
  241 NSNVWQQRSD ELEGEESEWK FVSKQQLQGM HGKETEEHFI GCEESWFPGT ANIGAGFTGM 300
  301 LLDGSNMHDT SECWDESSNG QDEQRSQVSE DAENKNYWNG IFSMVNSEQP PLQPPLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 41.69897 c-Myb, DNA-binding domain
    2 View Details [127..357] MSA 1.55199 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle