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Protein Overview: BBD2_ORYSJ

General Information:
Name(s) found: BBD2_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|51964834|ref|XP_507201.1| PREDICTED P0426E02.15-2 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50944773|ref|XP_481914.1| putative wound inductive gene [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38637503|dbj|BAD03757.1| putative wound inductive gene [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215740930|dbj|BAG97425.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|164375539|gb|ABY52937.1| putative wound responsive protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115476056|ref|NP_001061624.1| Os08g0357000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623593|dbj|BAF23538.1| Os08g0357000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica GN=BBD2 PE=2 SV=1 [Swiss-Prot]
  • putative wound inductive gene [Oryza sativa (japonica cultivar-group)]gi|51964834|ref|XP_507201.1| PREDICTED P0426E02.15-2 gene product [Oryza sativa (japonica cultivar-group)]gi|38637503|dbj|BAD03757.1| putative wound inductive gene [Oryza sativa (japo [nrdb_11152004_Chlamydomonas]
  • putative wound inductive gene [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os08g0357000 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMEGPILCR AVMQAKLPVT MISNSLTKSG QLGTAFLGCV CKYRNITRLI SPIYQPAQKN  60
   61 FATVCGSFSS SSDGNGYMAG NFSESDEDYV NSTVLEAVEV RSGAEGYVIK MRDGKNLRCV 120
  121 HNNSQGRNIP ESAPQPAIVL RIEDGSETLL PIIVLEMPSV LLMAAIRNVH IARPTIYQVV 180
  181 KEMIDKMGYE VKLVRINKRI QEAYCAELFL TKVGDHTESI TFDLRPSDAI NIAVRCKVPI 240
  241 QVHRSLAYSD GIRSVEPARM AIAAGMSDGL LFTELDRPDG QPCVEAQEFG LIRNMLIAAV 300
  301 EERYKDAATW RDKLMLLRSK RKNWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] deduced N/A No confident structure predictions are available.
    2 View Details [119..253] PSI-BLAST 35.0 CRYSTAL STRUCTURE OF C38A MUTANT OF HYPOTHETICAL PROTEIN (TM0160) FROM THERMOTOGA MARITIMA AT 2.8 A RESOLUTION
    3 View Details [254..325] PSI-BLAST 3.69897 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle