| Protein: | BBD2_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 325 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BBD2_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..2] | [322..3] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MAMEGPILCR AVMQAKLPVT MISNSLTKSG QLGTAFLGCV CKYRNITRLI SPIYQPAQKN 60
61 FATVCGSFSS SSDGNGYMAG NFSESDEDYV NSTVLEAVEV RSGAEGYVIK MRDGKNLR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [119-253] |
1 11 21 31 41 51
| | | | | |
1 CVHNNSQGRN IPESAPQPAI VLRIEDGSET LLPIIVLEMP SVLLMAAIRN VHIARPTIYQ 60
61 VVKEMIDKMG YEVKLVRINK RIQEAYCAEL FLTKVGDHTE SITFDLRPSD AINIAVRCKV 120
121 PIQVHRSLAY SDGIR
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1sj5A |
| Description: | CRYSTAL STRUCTURE OF C38A MUTANT OF HYPOTHETICAL PROTEIN (TM0160) FROM THERMOTOGA MARITIMA AT 2.8 A RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [254-325] |
1 11 21 31 41 51
| | | | | |
1 SVEPARMAIA AGMSDGLLFT ELDRPDGQPC VEAQEFGLIR NMLIAAVEER YKDAATWRDK 60
61 LMLLRSKRKN WA
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1c4oA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
