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Protein Overview: gi|57753893, gi|...

General Information:
Name(s) found: gi|57753893 [NCBI NR]
gi|50941595 [NCBI NR]
gi|40253600 [NCBI NR]
gi|222639998 [NCBI NR]
gi|215736920 [NCBI NR]
gi|115475023 [NCBI NR]
gi|113623077 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|57753893|dbj|BAD86793.1| SERK-family receptor-like protein kinase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|50941595|ref|XP_480325.1| putative somatic embryogenesis receptor kinase 1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|40253600|dbj|BAD05545.1| putative somatic embryogenesis receptor kinase 1 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222639998|gb|EEE68130.1| hypothetical protein OsJ_26221 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215736920|dbj|BAG95849.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115475023|ref|NP_001061108.1| Os08g0174700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623077|dbj|BAF23022.1| Os08g0174700 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 624 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAHRWAVWA VLLLRLLVPA ARVLANMEGD ALHSLRTNLV DPNNVLQSWD PTLVNPCTWF  60
   61 HVTCNNDNSV IRVDLGNAAL SGTLVPQLGQ LKNLQYLELY SNNISGTIPS ELGNLTNLVS 120
  121 LDLYLNNFTG PIPDSLGNLL KLRFLRLNNN SLSGSIPKSL TAITALQVLD LSNNNLSGEV 180
  181 PSTGSFSLFT PISFANNPSL CGPGTTKPCP GAPPFSPPPP YNPPTPVQSP GSSSSTGAIA 240
  241 GGVAAGAALL FAIPAIGFAW YRRRKPQEHF FDVPAEEDPE VHLGQLKRFS LRELQVATDT 300
  301 FSNKNILGRG GFGKVYKGRL ADGSLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR 360
  361 LRGFCMTPTE RLLVYPYMAN GSVASRLRER PPSEPPLDWR TRRRIALGSA RGLSYLHDHC 420
  421 DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK 480
  481 SSEKTDVFGY GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKEKRL EMLVDPDLQS 540
  541 NYIDVEVESL IQVALLCTQG SPTERPKMAE VVRMLEGDGL AERWEEWQKI EVVRQEVELG 600
  601 PHRNSEWIVD STDNLHAVEL SGPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..228] PSI-BLAST 17.69897 Polygalacturonase inhibiting protein PGIP
    2 View Details [229..284] deduced N/A No confident structure predictions are available.
    3 View Details [285..624] PSI-BLAST 66.30103 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • receptor activity
    		•  2.44108148686445 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.25077658159974 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.04507575991279 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle