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Protein Overview: gi|50941559, gi|...

General Information:
Name(s) found: gi|50941559 [NCBI NR]
gi|40253874 [NCBI NR]
gi|115475007 [NCBI NR]
gi|113623069 [NCBI NR]
Description(s) found:
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  • gi|50941559|ref|XP_480307.1| unknown protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|40253874|dbj|BAD05809.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115475007|ref|NP_001061100.1| Os08g0172200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113623069|dbj|BAF23014.1| Os08g0172200 [Oryza sativa Japonica Group] [NCBI NR]
  • unknown protein [Oryza sativa (japonica cultivar-group)]gi|40253874|dbj|BAD05809.1| unknown protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • unknown protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os08g0172200 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGIFACGSI SSAHGSCFRP ACLAVDDLRL FYKINSVTCG AYSWRWCVKK LHMRTNRRQM  60
   61 GTTVRTNARW LFGGDGRSSS NARMERSESA NEDILIFYFQ LDLQTRIQYA LNIEQFDVAK 120
  121 QLREKLTEIE TVIIRQREAK RGSSKTEAQD KAINLLRVRA DLQKAVDSEN YALAAALRDE 180
  181 IAKLETESLA VSAKALAYQN VKYAFRLGQK VRHKVHGYRA VICGMDHVCC ESKSWMETAN 240
  241 VENLSKGPNQ PFYQVLVDVY ADPELLVAYV AEENLAEAEI PEKGRFDHPY IEFLFFGEDT 300
  301 AGDFIPIKQL REKYDQPRYE ASGDEDDDDG STDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] FFAS03 1.51 N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
    2 View Details [182..334] PSI-BLAST 18.30103 Crystal structure of hypothetical protein from Esherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.412582209182696 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle