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Protein Overview: gi|50932981, gi|...

General Information:
Name(s) found: gi|50932981 [NCBI NR]
gi|48475230 [NCBI NR]
gi|222632764 [NCBI NR]
gi|215701013 [NCBI NR]
gi|115465787 [NCBI NR]
gi|113580044 [NCBI NR]
Description(s) found:
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  • gi|50932981|ref|XP_476018.1| unknown protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222632764|gb|EEE64896.1| hypothetical protein OsJ_19755 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215701013|dbj|BAG92437.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115465787|ref|NP_001056493.1| Os05g0592100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113580044|dbj|BAF18407.1| Os05g0592100 [Oryza sativa Japonica Group] [NCBI NR]
  • unknown protein [Oryza sativa (japonica cultivar-group)]gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • unknown protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os05g0592100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALALRCPAA ASPSPAKSTF PPSSSPPPSR LPRRPPASCR CYYYGDGGGF RKNYDHIPKQ  60
   61 FREENLKDGL MDNYKNVPQF LYGLSPAQIE MFMNDDNPYD RQSQRVTEES ISASRSYDEF 120
  121 GMYNLSGMHE GPAGYSMGMG MGTMSMGRAG RGYRRMRSSA PDLPSLLLDS RIIFLGMPIV 180
  181 PAVTELIAAQ FLWLDYDDRT KPIYLYINST GTMDENNELV ASETDAFAIA DFINRSKSKV 240
  241 YTINLSMAYG QAAMLLSLGV KGKRGVLPNS ITKLYLPKVH KSGGAAIDMW IKAKELDTNT 300
  301 DYYLELLSKG VGKPKEELAE FLKGPRYFRA QEAIDYGLAD TILHSLDGSF KPKDLTAQLA 360
  361 KAQEMRQSGK RPAAGAGRWS TPSVPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] deduced N/A No confident structure predictions are available.
    2 View Details [85..386] PSI-BLAST 73.522879 Crystallography and mutagenesis point to an essential role for the N-terminus of human mitochondrial ClpP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.860711153501883 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • ligase activity
    		•  0.394364519761538 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.138211479653256 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.32

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle