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Protein Overview: gi|50931833, gi|...

General Information:
Name(s) found: gi|50931833 [NCBI NR]
gi|46576037 [NCBI NR]
gi|222632019 [NCBI NR]
gi|125594671 [NCBI NR]
gi|115464545 [NCBI NR]
gi|113579423 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|50931833|ref|XP_475444.1| putative cation/hydrogen exchanger (CHX6a) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|46576037|gb|AAT01398.1| putative cation/hydrogen exchanger (CHX6a) [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222632019|gb|EEE64151.1| hypothetical protein OsJ_18983 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125594671|gb|EAZ34730.1| hypothetical protein OsJ_018213 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115464545|ref|NP_001055872.1| Os05g0485000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113579423|dbj|BAF17786.1| Os05g0485000 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 874 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPIMSGAAA AAGGTGGAVP LIKNATSASQ MSRGKAGTGA GAVVCYSPMM VTAYGIWQGA  60
   61 SPLDFSLPLF LLQVAIIVAT TRLLVILLKP FRQPRVIAEI LAGVILGPSV MGQVSTWAVK 120
  121 VFPERSLLTL ETVAHLGLLY FLFLVGLEMD VNTIRRSGKK ALIIAVAGMA LPFCIGTATS 180
  181 FIFRHQVSKN VHQASFLLFL GVALSVTAFP VLARILAEVK LLNSDLGRIA MSAAIVNDMC 240
  241 AWILLALAIA ISEVNSSAFS SLWVLIAGVA FVLACFYVVR PLMWWIVRRV PEGEAIGDVH 300
  301 ITLILTGVMV AGVCTDAIGI HSVFGAFVYG LVMPSGPLGV VLIEKLEDFV TGLLLPLFFA 360
  361 ISGLRTNVTK VRDPITVGLL VLVFVMASFA KIMGTILIAV SYTMTFRDGV ALGFLMNTRG 420
  421 LVEMIVLNIG RDKEVLDDES FAVMVLVSVA MTALVTPVVT TVYRPARRLV GYKRRNLQRS 480
  481 KHDAELRMLA CVHTTRNVPS IISLLELSNP TKRSPIFIYA LHLVELTGRA SNMLAAHHSA 540
  541 SNPGGASDHI FNAFESYEEM VGGVSVQALT AVSPYQTMHE DVCVLAEDKH VSLIVLPFHK 600
  601 QQTVDGGMEP INASLRGFNE SILASAPCSV GILVDRGLSA AAARMAAVHH VALLFFGGPD 660
  661 DREGLAYAWR MVENPGVCLT IVRLIPPGYT APAISPPQPP MPAAHSRAIN VVPEVAKSER 720
  721 QMDEEYLNEF RSRNLGNDAI LYVEQVVANS EETVAAIRSQ LDNAHELYIV GRHPGEASSP 780
  781 LTSALAEWME SPELGPIGDL LVSSEFSKMA SVLVMQQYVI TAPLPPPVAL AGPPTDDPVR 840
  841 QYLTNANQRP SVAIGGNQMG AAGRGGWSGG AGGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..478] PSI-BLAST 20.154902 Crystal structure of the Na+/H+ antiporter NhaA
    3 View Details [479..626] PSI-BLAST 15.09691 No description for 3c85A was found.
    4 View Details [627..874] MSA 1.130973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle