| General Information: |
|
| Name(s) found: |
gi|50930473
[NCBI NR]
gi|38345984 [NCBI NR] |
| Description(s) found:
Found 4 descriptions. SHOW ALL |
|
| Organism: | Oryza sativa Japonica Group |
| Length: | 1847 amino acids |
Gene Ontology: |
|
| Cellular Component: | NONE FOUND |
| Biological Process: | NONE FOUND |
| Molecular Function: | NONE FOUND |
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MAKAMEQERR EAKSRASALP GQRRLRRRVQ GEDYLPKEDD FALASSPPQR PKKPFRPIKP 60
61 RVNRVDDRQT AHQGPMSPYI IMYPCKCPFH KAGAVRGDLR AKPLRANATE EGREGEGCKA 120
121 EGKQRRTGHG RQGGSRAFGA SGRRWRRTIC FHTCAITNAF GPCRLCASAE RGRRGEGGCG 180
181 GKGTPDQGGD PFDKPTGGAP SRSIAAGSSL DYARRCAGPK QQQAYEAARR TKVTSAPILQ 240
241 YSAGYVPPQV HPQVMTQPFP PQVAQAPMYF AGQQSAAVAA QVHHQPPSQA PQIVAEGASA 300
301 LQAQLQAFLQ QLNQPHCISS TTPSAHPEGN TSQGAPNWLP PIQPGLGVSL WNQGPQFDFV 360
361 NAAQAPTVRQ QAPTPGFRTN QAPIQVAMTW SQPIFDPSMA AQQQGAVNRA GGEKGLPLSG 420
421 GIKTRPIPPQ FKFPPVPRYS GETDPKEFLS IYESAIEAAH GDENTKAKVI HLALDGIARS 480
481 WYFNLPANSI YSWEQLRDVF VLNFRGTYKE PKTQQHLLGI RQKQGESIRE YMRRFSQARC 540
541 QVQDITKASV INAASAGLLE GELTRKIANK EPQTLEHLLR IIDGFARGEE DSKRRQAIQV 600
601 EYDKASVAAA QAQAQVQVAE PPPLFVRQSQ PAIQGQPPRQ GQAPITWRKF RTDRAGKAVM 660
661 AVVEVQALRK EFDAEKASNH QQPARKRSEK TSTAPFTNAL RTPRNNAETL GNVATRKTQG 720
721 RSREQLSKHP AKQFRSKHPQ LNNAKMYSEG ITSAGKGAPQ YLNQLISFGP EDAEEVMFPH 780
781 QDPLVISAEI AGFEVRRILV DGGSSADVIF AEAYAKIGLP TQALTPAPAS LRGFGGEAVQ 840
841 VLGQALLLIA FGSGENRREE QILFDVVDIP YNYNAIFGRA TLNKFEAIFH HNYLKLKMPG 900
901 PTGVIVVKGL QRSAASKGDL AIINRAVHSV ETEPHERLKH TPKPTPHGKI TKVQIDDADP 960
961 TKLVSLGGDM GEEEVESILE VLKKNIDIFA WSPDEVGGVP ADLIMHHLAV KPDIKPRKQK1020
1021 LRKMSADRQE AAKAEVQKLL RAGVMQEIDH PEWLANPVLD AFRLEERRSN FRRLVYKVLG1080
1081 KQLGRNVEAY VDDIVVKSRK AFDHAIDLQE TFDSLRTAGI RLNPEKCVFG VRAGKLLGFL1140
1141 VSERGIEANP EKIDAIQQMK PPSSVHEVQK LAGRIAALSR FLSKAPERGL PFFKTLRGAG1200
1201 KFNWTPECQA AFDELKQYLQ STPALISTPP GSELLLYLAA SPVAVSAALV QETEFGQKPV1260
1261 YFVSEALQGA KTRYIEMEKL AYALVMASRK LKHYFQAHKV IVPSQYPLGE ILRGKEITGR1320
1321 LSKWAAELSP FNLHFVARSA IKSQVLANFV AEWTPVLAPD PEPAEQFWVM CSDGSWSHKG1380
1381 AGIAAVLFSP NGVPIWYAAR LQFDTTNNAA EYEAVLLGLR KAKALGVRRL LIRTDSKLVV1440
1441 GHVNKSFEAK EEGMKRHLEA IRSMEKCFTG ITVEHLPRDQ NEEADALAKS AACGGPHSPS1500
1501 IFFEVLHAPS VPMDSSEVMA IDQEKLGEDP YDWRTPFVKH LETGWLPVDE AEAKRLQLRA1560
1561 MKYKMVSGQL YRSGVLQPLL RCISFAEGEE MAKEIHQGLC GVHQAARTVA SKQYRSLYGK1620
1621 NIVCRFGVPK EFITDNAKQF DSDKFREMCE GLNLEIRFAS VAHPQSNGAA ERTNGKMLEA1680
1681 LKKRLEGAAK GKWPEELLSV LWALRTTPTR PTKFSLFMLL YGDEAMTPAE LGANSPRVMF1740
1741 SGGEEGCEVS LELLEGVRVE ALEHMHKYTT STSSTYNKKV RPMELMPGHL VLRKKANPVA1800
1801 VGKLESKWEG PYLIKHKSRT GYFRLSTLKG EEFDHSWNAA SLKCFYV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..235] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [236..510] | |
39.154902 | HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA); HIV-1 capsid protein |
| 3 | View Details | [511..627] | |
32.69897 | No description for 3dikA was found. |
| 4 | View Details | [628..761] | |
N/A | No confident structure predictions are available. |
| 5 | View Details | [762..887] | |
25.0 | CRYSTAL STRUCTURE OF A TETHERED DIMER OF HIV-1 PROTEASE COMPLEXED WITH AN INHIBITOR |
| 6 | View Details | [888..1513] | |
169.0 | No description for 2rf2A was found. |
| 7 | View Details | [1514..1847] | |
71.0 | N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)