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Protein Overview: gi|50928731, gi|...

General Information:
Name(s) found: gi|50928731 [NCBI NR]
gi|38345599 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|50928731|ref|XP_473893.1| OSJNBa0093O08.1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38345599|emb|CAD41882.2| OSJNBa0093O08.1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1025 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVMSHLLLH GGVLLLLLAA AAVQAQRVAT KTDPTEAAAL NAVFAKLGQQ ASLSTATWNI  60
   61 SGDPCTGAAT DGTPIDDNPN FNPAIKCDCT FQNNTVCRIT KLKIYALDVP GTIPQELRNL 120
  121 TRLTHLNLGQ NTLTGPLPSF IGELTNMQNM TFRINSLSGP IPKELGNLTN LVSLGLGSNR 180
  181 FNGSLPSELG NLDKLQELYI DSAGLSGPLP SSFSKLTRMQ TLWASDNDFT GQIPDYIGNW 240
  241 NLTDLRFQGN SFQGPIPSAL SNLVQLSSLR IGDIENGSSS SLAFIGNMTS LSILILRNCK 300
  301 ISDNLASIDF SKFASLNLLD LSFNNITGQV PTALLGLNLL NSLFLGNNSL SGSLPSSKGP 360
  361 SLSTLDFSYN QLSGNFPPWA SGKNLQLNLV ANNFVIDSSN NSILPSGLAC LQRNTPCFLG 420
  421 SPQSSSFAVD CGSNRLISAS DNLRYQTDDA SLGPASYSVT GAPTWGVSNV GKFVDAPNGS 480
  481 YIIYSSRQFQ NTLDSELFQT SRMSPSSLRY YGIGLENGNY TVTLQFAEFG IEDTQTWKSL 540
  541 GRRVFDIYLQ GERQEKNFDI RKAAGDKSYT VVKKSYKVPV TKNFLEIHLF WAGKGTCCIP 600
  601 GQGYYGPTIS ALSVTPADFT PTVGIVAEQN KSTSKTGVIV GVVVGVAVLG LVALVGIFMW 660
  661 RQKRRKLTLE QQELYSIVGR PNVFSYSELR SATENFSSSN RLGEGGYGAV YKGKLNDGRV 720
  721 VAVKQLSQTS HQGKKQFATE IETISRVQHR NLVKLYGCCL EGNNPLLVYE YMENGSLDKA 780
  781 LFGIEKLNID WPARFDICLG IARGLAYLHE ESSIRVVHRD IKASNVLLDA NLNPKISDFG 840
  841 LAKLYDDKKT HVSTKVAGTF GYLAPEYAMR GHMTEKVDVF AFGVVLLETL AGRPNYDDTL 900
  901 EEDKIYIFEW AWELYENNNP LGIVDPNLRE FNRAEVLRAI HVALLCTQGS PHQRPPMSRV 960
  961 VSMLTGDTEV TDVLMKPSYI TEWQIKGGNT SFANSAVRGQ SSSAPGSTSQ QASSVFLNSI1020
 1021 IQEGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..315] PSI-BLAST 45.39794 Polygalacturonase inhibiting protein PGIP
    2 View Details [316..432] deduced N/A No confident structure predictions are available.
    3 View Details [433..675] deduced N/A No confident structure predictions are available.
    4 View Details [676..1025] PSI-BLAST 72.0 No description for 2qkwB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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