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Protein Overview: gi|41469579, gi|...

General Information:
Name(s) found: gi|51964570 [NCBI NR]
gi|50917535 [NCBI NR]
gi|41469579 [NCBI NR]
gi|40714697 [NCBI NR]
gi|215704739 [NCBI NR]
gi|115454475 [NCBI NR]
gi|113549309 [NCBI NR]
gi|108710258 [NCBI NR]
gi|108710257 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|51964570|ref|XP_507070.1| PREDICTED OSJNBa0034D21.3 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50917535|ref|XP_469164.1| putative RNA pol II accessory factor (with alternative splicing) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|41469579|gb|AAS07322.1| putative RNA pol II accessory factor (with alternative splicing) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|40714697|gb|AAR88603.1| expressed protein, having alternative splicing products [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215704739|dbj|BAG94767.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115454475|ref|NP_001050838.1| Os03g0664700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113549309|dbj|BAF12752.1| Os03g0664700 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108710258|gb|ABF98053.1| RNA pol II accessory factor, Cdc73 family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108710257|gb|ABF98052.1| RNA pol II accessory factor, Cdc73 family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLAVLRDY AARGDLDKII FSGDEVLFGS EYTFPANAPT AFTNKQSGRP YPLSAAVFLA  60
   61 QHNDLKHTDF IQAARLRRIP PVSLPDRKTF LDFLRHGHHS LPTDPLLPSA LPSFAPEPQP 120
  121 AMPEEPEGDK ASGAYIRALE RTLKDRNALL DARGRDFLAV LQNATRREEE RRRNKDSAPS 180
  181 SARHEPSSAA AAAAMAKPKV ERSFGDGFVP IILVPSASQT LITIYNVREF LEDGVFVPSD 240
  241 ERMRAMKGSG KPECVMVQKK LIRGERAGAG GGATTFEVRD KPASLKADDW ARVVAVFVLG 300
  301 KEWQFKDWPF KDHVEIFNKV IGFYVRFEDD SVEAAKVVKQ WNVKIISISK NKRHQDRTAA 360
  361 LEVWERLEEF MRAHT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] deduced N/A No confident structure predictions are available.
    2 View Details [124..207] MSA 1.034987 View MSA. No confident structure predictions are available.
    3 View Details [208..375] MSA 5.037977 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle