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View Structure Prediction Details

Protein: gi|41469579, gi|...
Organism: Oryza sativa Japonica Group
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|41469579, gi|....

Description E-value Query
Range
Subject
Range
CDC73_ARATH - Protein CDC73 homolog OS=Arabidopsis thaliana GN=CDC73 PE=1 SV=1
358.0 [0..1] [375..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLAVLRDY AARGDLDKII FSGDEVLFGS EYTFPANAPT AFTNKQSGRP YPLSAAVFLA  60
   61 QHNDLKHTDF IQAARLRRIP PVSLPDRKTF LDFLRHGHHS LPTDPLLPSA LPSFAPEPQP 120
  121 AMP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEPEGDKASG AYIRALERTL KDRNALLDAR GRDFLAVLQN ATRREEERRR NKDSAPSSAR  60
   61 HEPSSAAAAA AMAKPKVERS FGDG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [208-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVPIILVPSA SQTLITIYNV REFLEDGVFV PSDERMRAMK GSGKPECVMV QKKLIRGERA  60
   61 GAGGGATTFE VRDKPASLKA DDWARVVAVF VLGKEWQFKD WPFKDHVEIF NKVIGFYVRF 120
  121 EDDSVEAAKV VKQWNVKIIS ISKNKRHQDR TAALEVWERL EEFMRAHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle