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Protein Overview: gi|41053020, gi|...

General Information:
Name(s) found: gi|50904891 [NCBI NR]
gi|41053020 [NCBI NR]
gi|125580627 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50904891|ref|XP_463934.1| putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|41053020|dbj|BAD07951.1| putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125580627|gb|EAZ21558.1| hypothetical protein OsJ_005041 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 927 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRFWGQGD SDSEEEEQEI ESEAGSESED EGGDAGGRSG NQNRYLRTTN ASDSDESDSG  60
   61 QRVVRSLKDK RNEELKITVD QMRNAMKIND WVNLQESFEK LNKQLEKVVR VNESSTVPNM 120
  121 YIKALVLLED FLAEALANKE AKKKMSSSNA KALNAMKQKL KKNNKQYENL IQECREHPER 180
  181 FEDDDVEDKD DDDETEDEDS DAEEDPEKIA MSESDEGDDD EEDDQDGGDW VRHTNKKDKL 240
  241 MDKQFLKDPS EITWDIVDKK LKEIVASRGK KGTGRVERVE QLTFLTRVAK TPAQKLEILF 300
  301 HVISAQFDVN PSLLGHMPVN MWKKCVNNML LVLDILQQYP NIVVDTSVEP DEKETQKGAD 360
  361 YDGKIHVTGD LVAFLERLDS EFFKSLQCTD PYTKDYVQRL RDEPLFLVVA QNVQDYLEHV 420
  421 GNFKAEAKVA LRRVELVYYK PQEVYDSMRK LAEQDEDSRE DEDAEADEER QVSDNNRGPP 480
  481 PFVVIPEVVP RKPTFPESGR ALMDALMSVI YKYGDERTKA RAMLCDIYHH AISDEFSVAR 540
  541 DLLLMSHLQD GVQLMDISSQ ILFNRVMAQL GLCAFRAGLI IEAHGCLSEL YSTGRVKELL 600
  601 AQGVQQSRYH EKTPEQERLE RRRQMPYHMH INLELLEATH LICAMLIEVP NMAASTYDKR 660
  661 KFMNRTFRRL LEISERQTFV GPPENVRDHV MAATRALSKG DHQKAFDVIN SLEIWKLLRN 720
  721 KEHVLEMLKL KIKEEALRTY LFSYSSCYQS LSLDQLTTMF DLSEQQAHSI VSKMMMHEEL 780
  781 HASWDQPTKC IIFHNVDQTR LQGLLFQMAD KLSVLVESNE RAYEAKTGGT FEGAPPRRRG 840
  841 DAQDSSNLGK WQENFVSSQG RQGGGRSGYS GRGGGSGRGG GGYQRDRGSQ GSRGGYGGGS 900
  901 RFQDGGRSRT GSMAKGGGDG GARMLTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 4.0 Heavy meromyosin subfragment
    2 View Details [363..487] deduced N/A No confident structure predictions are available.
    3 View Details [488..675] deduced N/A No confident structure predictions are available.
    4 View Details [676..822] Pfam 34.124939 No description for PF01399.19 was found. No confident structure predictions are available.
    5 View Details [823..927] PSI-BLAST 4.39794 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle