| Protein: | gi|41053020, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 927 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|41053020, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
1066.0 | [0..8] | [924..63] |
|
|
958.0 | [0..1] | [927..1] |
|
|
939.0 | [0..1] | [927..1] |
|
|
924.0 | [0..1] | [916..1] |
|
|
907.0 | [0..17] | [860..109] |
|
|
880.0 | [0..17] | [889..2] |
|
|
854.0 | [0..39] | [879..55] |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MASRFWGQGD SDSEEEEQEI ESEAGSESED EGGDAGGRSG NQNRYLRTTN ASDSDESDSG 60
61 QRVVRSLKDK RNEELKITVD QMRNAMKIND WVNLQESFEK LNKQLEKVVR VNESSTVPNM 120
121 YIKALVLLED FLAEALANKE AKKKMSSSNA KALNAMKQKL KKNNKQYENL IQECREHPER 180
181 FEDDDVEDKD DDDETEDEDS DAEEDPEKIA MSESDEGDDD EEDDQDGGDW VRHTNKKDKL 240
241 MDKQFLKDPS EITWDIVDKK LKEIVASRGK KGTGRVERVE QLTFLTRVAK TPAQKLEILF 300
301 HVISAQFDVN PSLLGHMPVN MWKKCVNNML LVLDILQQYP NIVVDTSVEP DEKETQKGAD 360
361 YD
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-487] |
1 11 21 31 41 51
| | | | | |
1 GKIHVTGDLV AFLERLDSEF FKSLQCTDPY TKDYVQRLRD EPLFLVVAQN VQDYLEHVGN 60
61 FKAEAKVALR RVELVYYKPQ EVYDSMRKLA EQDEDSREDE DAEADEERQV SDNNRGPPPF 120
121 VVIPE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [488-675] |
1 11 21 31 41 51
| | | | | |
1 VVPRKPTFPE SGRALMDALM SVIYKYGDER TKARAMLCDI YHHAISDEFS VARDLLLMSH 60
61 LQDGVQLMDI SSQILFNRVM AQLGLCAFRA GLIIEAHGCL SELYSTGRVK ELLAQGVQQS 120
121 RYHEKTPEQE RLERRRQMPY HMHINLELLE ATHLICAMLI EVPNMAASTY DKRKFMNRTF 180
181 RRLLEISE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [676-822] |
1 11 21 31 41 51
| | | | | |
1 RQTFVGPPEN VRDHVMAATR ALSKGDHQKA FDVINSLEIW KLLRNKEHVL EMLKLKIKEE 60
61 ALRTYLFSYS SCYQSLSLDQ LTTMFDLSEQ QAHSIVSKMM MHEELHASWD QPTKCIIFHN 120
121 VDQTRLQGLL FQMADKLSVL VESNERA
|
| Detection Method: | |
| Confidence: | 34.124939 |
| Match: | PF01399.19 |
| Description: | No description for PF01399.19 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [823-927] |
1 11 21 31 41 51
| | | | | |
1 YEAKTGGTFE GAPPRRRGDA QDSSNLGKWQ ENFVSSQGRQ GGGRSGYSGR GGGSGRGGGG 60
61 YQRDRGSQGS RGGYGGGSRF QDGGRSRTGS MAKGGGDGGA RMLTV
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
