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Protein Overview: gi|28875985, gi|...

General Information:
Name(s) found: gi|34896992 [NCBI NR]
gi|28875985 [NCBI NR]
gi|222625325 [NCBI NR]
gi|125860402 [NCBI NR]
gi|115454015 [NCBI NR]
gi|113549079 [NCBI NR]
gi|108709666 [NCBI NR]
Description(s) found:
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  • gi|34896992|ref|NP_909842.1| putative ACT domain repeat protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • putative ACT domain repeat protein [Oryza sativa (japonica cultivar-group)]gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os03g0598100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • ACT domain containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative ACT domain repeat protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMDEGYGPT WDSDDEYDNF IRKMNPPRIE IDNDSCNDAT IVRVDSANEY GILLEVIQVL  60
   61 IDLNLVISKA YITSDGGWVM DVFNITDKEG QKLKDKATIA RIEDYICKSL GADSRYIPSR 120
  121 RRSVDVAASS DHNVIELTGT DRPGLLSEVS AVLASLKCNV VSAEIWTHNT RAAAVMRVTD 180
  181 EGTGSAVTDA DRLERIRDRL SYLLRGGNLS RGAAMAVSTG TCSTHTERRL HQMMLDDGDH 240
  241 EQLHRHPPNQ SQRPNVTVSN WNDKDYSVVT IRCKDRPKLL FDTVCTLTDL HYVVFHANID 300
  301 AKDNQAYQEF YVRHVNGSPM HTEADRLRVI QCLEAAIERR VSEGVKLELC TNDKVGLLSE 360
  361 VTRIFRENSL TVTRAEVSTR GRMAVNTFYV RDSTGGTVDQ KTIDSIRQAI GQNIQVKGQP 420
  421 EPSEPQKKES PTWFLFANLF RPRSLYSFGM FMR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..453] PSI-BLAST 11.522879 No description for 2hmfA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.30332889821949 bayes_pls_golite062009
  • transferase activity
    		•  1.91604890459534 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.34552922327962 bayes_pls_golite062009
  • kinase activity
    		•  1.33428210469169 bayes_pls_golite062009
  • phosphotransferase activity, carboxyl group as acceptor
    		•  0.29333418042449 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle