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View Structure Prediction Details

Protein: gi|28875985, gi|...
Organism: Oryza sativa Japonica Group
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28875985, gi|....

Description E-value Query
Range
Subject
Range
gi|115453517, gi... - gi|50916533|ref|XP_468663.1| putative ACT domain containing protein, ACR4, with alternative splicing...
319.0 [0..10] [450..9]

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Predicted Domain #1
Region A:
Residues: [1-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMDEGYGPT WDSDDEYDNF IRKMNPPRIE IDNDSCNDAT IVRVDSANEY GILLEVIQVL  60
   61 IDLNLVISKA YITSDGGWVM DVFNITDKEG QKLKDKATIA RIEDYICKSL GADSRYIPSR 120
  121 RRSVDVAASS DHNVIELTGT DRPGLLSEVS AVLASLKCNV VSAEIWTHNT RAAAVMRVTD 180
  181 EGTGSAVTDA DRLERIRDRL SYLLRGGNLS RGAAMAVSTG TCSTHTERRL HQMMLDDGDH 240
  241 EQLHRHPPNQ SQRPNVTVSN WNDKDYSVVT IRCKDRPKLL FDTVCTLTDL HYVVFHANID 300
  301 AKDNQAYQEF YVRHVNGSPM HTEADRLRVI QCLEAAIERR VSEGVKLELC TNDKVGLLSE 360
  361 VTRIFRENSL TVTRAEVSTR GRMAVNTFYV RDSTGGTVDQ KTIDSIRQAI GQNIQVKGQP 420
  421 EPSEPQKKES PTWFLFANLF RPRSLYSFGM FMR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.522879
Match: 2hmfA
Description: No description for 2hmfA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 2.30332889821949 bayes_pls_golite062009
transferase activity 1.91604890459534 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.34552922327962 bayes_pls_golite062009
kinase activity 1.33428210469169 bayes_pls_golite062009
phosphotransferase activity, carboxyl group as acceptor 0.29333418042449 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle