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Protein Overview: DAPB_VIBCH

General Information:
Name(s) found: DAPB_VIBCH [Swiss-Prot]
Description(s) found:
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  • gi|9656964|gb|AAF95534.1| dihydrodipicolinate reductase [Vibrio cholerae O1 biovar El Tor str. N16961] [NCBI NR]
  • gi|15642388|ref|NP_232021.1| dihydrodipicolinate reductase [Vibrio cholerae O1 biovar eltor str. N16961] [NCBI NR]
  • 4-hydroxy-tetrahydrodipicolinate reductase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=dapB PE=3 SV=1 [Swiss-Prot]
  • dihydrodipicolinate reductase [Vibrio cholerae O1 biovar eltor str. N16961]gi|15642388|ref|NP_232021.1| dihydrodipicolinate reductase [Vibrio cholerae O1 biovar eltor str. N16961]gi|11252352|pir||C82080 dihydrodipicolinate reductase VC2391 [imported] - [nrdb_11152004_Chlamydomonas]
  • dihydrodipicolinate reductase [Vibrio cholerae O1 biovar eltor str. N16961] [nr-271106-contam.fasta]
    • Organism: Vibrio cholerae O1 biovar El Tor str. N16961
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRIAIAGAA GRMGRNLVKA THQNPLSELG AGSERPESSL VGVDIGELCG IGKQGIVLVD  60
   61 NLEQAVEQFD VIIDFTAPAS TLANLALCEQ HGKKLVIGTT GFTDAQRQTI EQAAKKIPIV 120
  121 MAPNYSVGVN LVFKLLEKAA KVMGDYCDIE IIEAHHRHKV DAPSGTAIGM GEAIAHAMGN 180
  181 QLSDVAVYAR EGITGERSRN EIGFATIRAG DIIGEHTAMF ADIGERVEIT HKATDRMTFA 240
  241 NGAVKAAIWL AEQPAGFYTM IDVLGLNDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 76.522879 Dihydrodipicolinate reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.60548927745815 bayes_pls_golite062009
  • catalytic activity
    		•  2.54843319568228 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.54909195188343 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  0.841370849960815 bayes_pls_golite062009
  • saccharopine dehydrogenase activity
    		•  0.495113665163626 bayes_pls_golite062009
  • N-acetyl-gamma-glutamyl-phosphate reductase activity
    		•  0.0651785123513661 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle