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Protein Overview: gi|47497675, gi|...

General Information:
Name(s) found: gi|50900320 [NCBI NR]
gi|47497675 [NCBI NR]
gi|255678964 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50900320|ref|XP_450948.1| RING-H2 zinc finger protein ATL6-like [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|47497675|dbj|BAD19742.1| RING-H2 zinc finger protein ATL6-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|255678964|dbj|BAH94605.1| Os09g0468300 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPARVHSNG RLLMLLLLLA VAGFAAAQPS QDNPPAGYYA TNFSPSMAIV IVVLIAAFFF  60
   61 LGFFSIYVRH CYGGRGDYST TPLPRSGAAR SRRQRGLDQS VLATFPTMAY ADVKAHKSVK 120
  121 GALECAVCIS EFDDDETLRL LPKCSHVFHQ DCIDTWLASH ATCPVCRANL VDGASEPASD 180
  181 VAAELPTAPA PRPEGATPSE AAAPGGEAPA AAAAAAVVID VEETEEERII REEAAELTRI 240
  241 GSLKRALRSK SGRAPAARFP RSHSTGHSLS SSAAASAGAE RFTLRLPEHV LREVIAAGQL 300
  301 QRTTSLVAFR AGRQGSTRRG LRSGGGGGGG EGSSRAGRSV RLGQSGRWPS FLPRTFSARL 360
  361 PAWGSRSTRR GDGDGSSKGG RTAGSGAGAG GK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..184] PSI-BLAST 12.69897 EL5 RING-H2 domain
    3 View Details [185..307] MSA 1.861995 View MSA. No confident structure predictions are available.
    4 View Details [308..392] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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