YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|110288837, gi...

General Information:
Name(s) found: gi|37532372 [NCBI NR]
gi|31430930 [NCBI NR]
gi|19881629 [NCBI NR]
gi|115481456 [NCBI NR]
gi|113638930 [NCBI NR]
gi|110288837 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|37532372|ref|NP_920488.1| putative Riboflavin biosynthesis protein ribF [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gb|AAP52775.1| putative Riboflavin biosynthesis protein ribF [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|19881629|gb|AAM01030.1|AC091735_3 Putative Riboflavin biosynthesis protein ribF [Oryza sativa] [NCBI NR]
  • gi|115481456|ref|NP_001064321.1| Os10g0209300 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113638930|dbj|BAF26235.1| Os10g0209300 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|110288837|gb|ABG65995.1| Riboflavin kinase/FAD synthetase family protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • putative Riboflavin biosynthesis protein ribF [Oryza sativa (japonica cultivar-group)]gi|31430930|gb|AAP52775.1| putative Riboflavin biosynthesis protein ribF [Oryza sativa (japonica cultivar-group)]gi|19881629|gb|AAM01030.1| Putative Riboflavin biosynt [nrdb_11152004_Chlamydomonas]
  • Riboflavin kinase/FAD synthetase family protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Putative Riboflavin biosynthesis protein ribF [Oryza sativa] [nr-271106-contam.fasta]
  • Os10g0209300 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 329 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAPCSPSGK KRDKMRKKEI VLWCNIKALP GANRLIKHLK SNGVPAALAS NSPGSNIEAK  60
   61 ISCHQGWKES FSAIVGGDEV EKGKPSPDIF LEAAKRMNTN PPNCLVIEDS LCCSWKSCRN 120
  121 ACIAVPSVPK RTAEFSSADE VINSLLDVRP EKWGLRPFSD WIDDTLPIEP WFIGGSVIKG 180
  181 FGRGSKVLGI PTANLPAENF SDVLSEHTSR VYFGWAGLST RGIYKMVMSI GWNPYFDNTE 240
  241 KTIEPWLLHD FGEDFYGEEL RLVIVGYIRP EANFPSLESL IERIHEDARI AEKALNLPLY 300
  301 AKYTDSPYLR NSLKEDNSAN GNQSVIDSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] PSI-BLAST 23.39794 No description for 2hszA was found.
    2 View Details [157..329] PSI-BLAST 45.69897 Crystal structure of riboflavin kinase with ternary product complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.263520144636139 bayes_pls_golite062009
  • phosphatase activity
    		•  0.159899259988948 bayes_pls_golite062009
  • hydrolase activity
    		•  0.157008618907775 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.103902756538853 bayes_pls_golite062009
  • DNA binding
    		•  0.0142681844140111 bayes_pls_golite062009
    2
    Term Confidence Notes
  • riboflavin kinase activity
    		•  9.29267848240079 bayes_pls_golite062009
  • FMN adenylyltransferase activity
    		•  7.46254172012226 bayes_pls_golite062009
  • kinase activity
    		•  2.06841232315201 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.04516341526682 bayes_pls_golite062009
  • adenylyltransferase activity
    		•  2.0444249049462 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.03375669869689 bayes_pls_golite062009
  • catalytic activity
    		•  2.03120709726017 bayes_pls_golite062009
  • transferase activity
    		•  1.98609814060536 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.19728391053646 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle