Protein Overview: gi|18844938, gi|...

General Information:
Name(s) found:	gi\|34914100 [NCBI NR] gi\|215678896 [NCBI NR] gi\|18844938 [NCBI NR] gi\|115437652 [NCBI NR] gi\|113532879 [NCBI NR]
Description(s) found: Found 8 descriptions. SHOW ALL	gi\|34914100\|ref\|NP_918397.1\| similar to vesicle transport protein [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|215678896\|dbj\|BAG95333.1\| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR] gi\|18844938\|dbj\|BAB85407.1\| vesicle transport v-SNARE (vesicle soluble NSF attachment protein receptor) protein-like [Oryza sativa Japonica Group] [NCBI NR] gi\|115437652\|ref\|NP_001043348.1\| Os01g0560200 [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|113532879\|dbj\|BAF05262.1\| Os01g0560200 [Oryza sativa Japonica Group] [NCBI NR]
Organism:	Oryza sativa Japonica Group
Length:	221 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVFEGYER QYCEISASLA RKCTAASALQ GEKLKQKASE IKSGIDGAEA LIKKMDLEAR  60
   61 NQQPSVRAGL LAKLREYKSD LNNLKGTLKR VTTGNAQQGS REELLESGMA ETLGVSADQK 120
  121 SRLLRITEKQ NKTTDRIRDS HRTMLETEDL GVSLLQDLHQ QRERLIHAHG TLDNVDDNIG 180
  181 KSRRIMGAMV RRMDRNKWII GFIIALLVLV ILVILYFKFV H

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
phosphatidic acid binding	5.99692791841048	bayes_pls_golite062009
SNAP receptor activity	3.50393203740159	bayes_pls_golite062009
calcium channel inhibitor activity	2.99240433552966	bayes_pls_golite062009
protein transporter activity	2.96543140800925	bayes_pls_golite062009
arachidonic acid binding	2.43181217934756	bayes_pls_golite062009
binding	2.18404492932496	bayes_pls_golite062009
SNARE binding	1.85060343142976	bayes_pls_golite062009
protein binding	1.82422117934251	bayes_pls_golite062009
transporter activity	1.74189664015129	bayes_pls_golite062009
substrate-specific transporter activity	1.49085442233849	bayes_pls_golite062009
transmembrane transporter activity	1.13101548288086	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.643064875848901	bayes_pls_golite062009
ion transmembrane transporter activity	0.370484918396857	bayes_pls_golite062009
channel activity	0.0647076360772156	bayes_pls_golite062009
passive transmembrane transporter activity	0.0647076360772156	bayes_pls_golite062009
substrate-specific channel activity	0.0435980899803177	bayes_pls_golite062009
phospholipid binding	0.0172309833091902	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..221]	PSI-BLAST	15.0	Syntaxin 1A N-terminal domain

Protein Overview: gi|18844938, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: