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Protein Overview: gi|215767648, gi...

General Information:
Name(s) found: gi|34905886 [NCBI NR]
gi|21902071 [NCBI NR]
gi|215767648 [NCBI NR]
Description(s) found:
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  • gi|34905886|ref|NP_914290.1| similar to 5-oxoprolinase [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|21902071|dbj|BAC05619.1| putative 5-oxoprolinase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215767648|dbj|BAG99876.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • similar to 5-oxoprolinase [Oryza sativa (japonica cultivar-group)]gi|21902071|dbj|BAC05619.1| similar to 5-oxoprolinase [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • putative 5-oxoprolinase [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 1257 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTEKFRFC IDRGGTFTDI YAEVPGRREG YVMKLLSVDP SNYDDAPIEG IRRILQEFSG  60
   61 ERIPRSSKIP TGKIDWIRMG TTVATNALLE RKGERIALCV TRGFRDLLQI GNQARPNIFD 120
  121 LKVSKPSNLY EEVVEVDERV ELVGGGDGER DDGLSVKGIS GELVRVAKPV DVEALKPLLK 180
  181 GLLDKGIRCL AVVLMHSYTY PQHELLIEKL SLEMGFKHVS LSSSLTPMVR AVPRGLTASV 240
  241 DAYLTPVIKE YLSGFMSRFE GGGEQVNVLF MQSDGGLAPE RRFSGHKAVL SGPAGGVVGY 300
  301 SQTLFQLETS KPLIGFDMGG TSTDVSRYDG SYEQVLETQI AGAIIQAPQL DINTVAAGGG 360
  361 SKLKFQFGAF KVGPDSVGAH PGPVCYRKGG ELAITDANLI LGTVIPEYFP SIFGPNEDLP 420
  421 LDYDATKKAF EILAVEINSH RKSQDPSAKD MTVEEIALGF VNVANEAMCR PIRQLTEMKG 480
  481 HDTKNHALAC FGGAGPQHAC AMARSLGMSE LLIHRYCGIL SAYGMGLADV IEDLQEPYSA 540
  541 IYNVDSAAEA SRRVDLLVKQ VKEKLIEQGF GEDSIRTHSY LNLRYEGTDT AIMVKQPERE 600
  601 SGSDYADEFV KLFQQEYGFK LLNRKILICD VRVQGVGATN ILQPHELTPV STKPVPESSC 660
  661 RIYFSYGWQE TPLYKLQNLG YGHVLKGPAV IMNGNSTVIV EKDCKAIITK YGNIKIEISA 720
  721 APSSVEVSET VADVVQLSIF NHRFMGIAEQ MGRTLQRTSI STNIKERLDF SCALFGPDGG 780
  781 LVANAPHVPV HLGAMSSTVR WQLKYWGDNL HEGDVLVTNH PCSGGSHLPD ITVVTPVFNE 840
  841 GKVIFFVASR GHHAEIGGIT PGSMPPFSKS IWEEGAAIKA FKLVERGVFQ EEGIIHLLQS 900
  901 PSYDELTNHK IPGTRKIQDN LSDLHAQVAA NQRGITLIKE LINQYGLITV QSYMNHVQNN 960
  961 AEEAVREMLK VVASRVEKEN GSCVIEDEDY MDDGSVLHLK LTLDSSKGEA TFDFEGTSPE1020
 1021 VYGNWNAPEA VTAAAVIYCL RCLVDVDIPL NQGCLAPVKI LIPKGSFLSP SDKAAVVGGN1080
 1081 VLTSQRVTDV VLMAFQACAC SQGCMNNLTF GDDTFGYYET IGGGSGAGAS WDGTSGVQCH1140
 1141 MTNTRMTDPE IFEQRYPVLL HRFSIRENSG GSGFHRGGDG LVREIEFCQP VVVSILSERR1200
 1201 VHAPRGLKGG RNGARGANYL VKKDGRRVYL GGKNTVMVNA GEILQILTPG GGGFGSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] MSA 4.249996 View MSA. No confident structure predictions are available.
    2 View Details [63..278] deduced N/A No confident structure predictions are available.
    3 View Details [279..569] MSA 2.258982 View MSA. No confident structure predictions are available.
    4 View Details [570..724] MSA 1.213981 View MSA. No confident structure predictions are available.
    5 View Details [725..825] MSA 3.158989 View MSA. No confident structure predictions are available.
    6 View Details [826..941] deduced N/A No confident structure predictions are available.
    7 View Details [942..1099] MSA 2.157983 View MSA. No confident structure predictions are available.
    8 View Details [1100..1165] MSA 1.157989 View MSA. No confident structure predictions are available.
    9 View Details [1166..1257] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle