YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|215767648, gi...
Organism:	Oryza sativa Japonica Group
Length:	1257 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215767648, gi....

Description	E-value	Query Range	Subject Range
gi\|92896162 - gi\|92896162\|gb\|ABE93080.1\| Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxopr...	1522.0	[0..1]	[1257..1]
OPLA_ARATH - 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1	1522.0	[0..1]	[1256..1]
gi\|115976117, gi... - gi\|115976117\|ref\|XP_001192546.1\| PREDICTED: similar to 5-oxoprolinase (ATP-hydrolysing) [Strongyloce...	1475.0	[0..3]	[1257..9]
gi\|108884166, gi... - gi\|157105009\|ref\|XP_001648674.1\| hypothetical protein AaeL_AAEL000581 [Aedes aegypti], gi\|108884166\|...	1463.0	[0..1]	[1257..1]
gi\|19916241, gi\|... - gi\|20091138\|ref\|NP_617213.1\| 5-oxoprolinase (ATP-hydrolyzing) [Methanosarcina acetivorans C2A], gi\|1...	1448.0	[0..1]	[1256..1]
gi\|110756056 - gi\|110756056\|ref\|XP_001121487.1\| PREDICTED: similar to 5-oxoprolinase (ATP-hydrolysing) [Apis mellif...	1436.0	[0..1]	[1248..1]
gi\|21229014, gi\|... - gi\|21229014\|ref\|NP_634936.1\| 5-oxoprolinase [Methanosarcina mazei Go1], gi\|20907558\|gb\|AAM32608.1\| 5...	1435.0	[0..1]	[1257..1]
gi\|67527029, gi\|... - gi\|67527029\|ref\|XP_661576.1\| hypothetical protein AN3972.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	1434.0	[0..1]	[1255..1]
gi\|49642166 - gi\|49642166\|emb\|CAH01884.1\| KLLA0C18700p [Kluyveromyces lactis] gi\|50306143, gi\|... - gi\|50306143\|ref\|XP_453033.1\| unnamed protein product [Kluyveromyces lactis], gi\|49642166\|emb\|CAH0188...	1434.0	[0..6]	[1255..3]
OPLAH - 5-oxoprolinase (ATP-hydrolysing) HGNC:8149\|Ensemb... - (ATP-hydrolysing) gi\|147897953, gi... - gi\|208967589\|dbj\|BAG72440.1\| 5-oxoprolinase [synthetic construct], gi\|147897953\|gb\|AAI40371.1\| 5-oxo...	1433.0	[0..1]	[1257..1]

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Predicted Domain #1

Region A:
Residues: [1-62]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTEKFRFC IDRGGTFTDI YAEVPGRREG YVMKLLSVDP SNYDDAPIEG IRRILQEFSG  60
   61 ER

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [63-278]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPRSSKIPTG KIDWIRMGTT VATNALLERK GERIALCVTR GFRDLLQIGN QARPNIFDLK  60
   61 VSKPSNLYEE VVEVDERVEL VGGGDGERDD GLSVKGISGE LVRVAKPVDV EALKPLLKGL 120
  121 LDKGIRCLAV VLMHSYTYPQ HELLIEKLSL EMGFKHVSLS SSLTPMVRAV PRGLTASVDA 180
  181 YLTPVIKEYL SGFMSRFEGG GEQVNVLFMQ SDGGLA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [279-569]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PERRFSGHKA VLSGPAGGVV GYSQTLFQLE TSKPLIGFDM GGTSTDVSRY DGSYEQVLET  60
   61 QIAGAIIQAP QLDINTVAAG GGSKLKFQFG AFKVGPDSVG AHPGPVCYRK GGELAITDAN 120
  121 LILGTVIPEY FPSIFGPNED LPLDYDATKK AFEILAVEIN SHRKSQDPSA KDMTVEEIAL 180
  181 GFVNVANEAM CRPIRQLTEM KGHDTKNHAL ACFGGAGPQH ACAMARSLGM SELLIHRYCG 240
  241 ILSAYGMGLA DVIEDLQEPY SAIYNVDSAA EASRRVDLLV KQVKEKLIEQ G

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [570-724]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGEDSIRTHS YLNLRYEGTD TAIMVKQPER ESGSDYADEF VKLFQQEYGF KLLNRKILIC  60
   61 DVRVQGVGAT NILQPHELTP VSTKPVPESS CRIYFSYGWQ ETPLYKLQNL GYGHVLKGPA 120
  121 VIMNGNSTVI VEKDCKAIIT KYGNIKIEIS AAPSS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5

Region A:
Residues: [725-825]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEVSETVADV VQLSIFNHRF MGIAEQMGRT LQRTSISTNI KERLDFSCAL FGPDGGLVAN  60
   61 APHVPVHLGA MSSTVRWQLK YWGDNLHEGD VLVTNHPCSG G

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6

Region A:
Residues: [826-941]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHLPDITVVT PVFNEGKVIF FVASRGHHAE IGGITPGSMP PFSKSIWEEG AAIKAFKLVE  60
   61 RGVFQEEGII HLLQSPSYDE LTNHKIPGTR KIQDNLSDLH AQVAANQRGI TLIKEL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7

Region A:
Residues: [942-1099]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INQYGLITVQ SYMNHVQNNA EEAVREMLKV VASRVEKENG SCVIEDEDYM DDGSVLHLKL  60
   61 TLDSSKGEAT FDFEGTSPEV YGNWNAPEAV TAAAVIYCLR CLVDVDIPLN QGCLAPVKIL 120
  121 IPKGSFLSPS DKAAVVGGNV LTSQRVTDVV LMAFQACA

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8

Region A:
Residues: [1100-1165]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSQGCMNNLT FGDDTFGYYE TIGGGSGAGA SWDGTSGVQC HMTNTRMTDP EIFEQRYPVL  60
   61 LHRFSI

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9

Region A:
Residues: [1166-1257]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RENSGGSGFH RGGDGLVREI EFCQPVVVSI LSERRVHAPR GLKGGRNGAR GANYLVKKDG  60
   61 RRVYLGGKNT VMVNAGEILQ ILTPGGGGFG SP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits