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Protein Overview: gi|41469489, gi|...

General Information:
Name(s) found: gi|50917169 [NCBI NR]
gi|41469489 [NCBI NR]
gi|108709987 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|50917169|ref|XP_468981.1| expressed protein (with alternative splicing) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|41469489|gb|AAS07274.1| expressed protein (with alternative splicing) [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108709987|gb|ABF97782.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDHHHHHHP RRGSRHAAAG DLRPPEPPLD PLEFLSRSWS ASASALDAPR PPPPAPSPSA  60
   61 VLGIGPIAED ASSAATAACE VVDDGSAFAA AGSSFSFASA ATSQLIMERI LAQSEVAPLT 120
  121 SGRLSHSSGP LTGGGSITDS PPVSPEIDDA KYCRAASTPK PQMYRGGNKT VGRWLKDRKE 180
  181 KKKEETRAHN AQVHAAVSVA AVAAAVAAVA AATAAASGSG KDDRAARTDM AMASAATLVA 240
  241 AQCVEAAESM GAEREHLEAV IGSAVNVRTP GDIVTVTAAA ATALRGAATL KARALKEVWN 300
  301 IAAVIPVEKG TMGGGHHHKQ NMQKQHRKLE SNGSSISDDL SLEEENNFLG ICSQELLARG 360
  361 TELLKRTRKG ALHWKVVSVY INRMGLVMLK MKSRHVAGTI TKKKKSVVID VCKDVAAWPG 420
  421 RHLLEDGEHR RYFGLRTAEH RVIEFECTSQ REYEMWTKGV ARLLIIASER KRAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] FFAS03 0.953 No description for 2nsgA was found.
    2 View Details [284..357] MSA 1.026983 View MSA. No confident structure predictions are available.
    3 View Details [358..474] Pfam 65.39794 No description for PF08458.1 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle