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Protein Overview: gi|34897010, gi|...

General Information:
Name(s) found: gi|34897010 [NCBI NR]
gi|215697724 [NCBI NR]
gi|12656811 [NCBI NR]
gi|125587481 [NCBI NR]
gi|108710417 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|34897010|ref|NP_909851.1| putative homeodomain protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215697724|dbj|BAG91718.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|12656811|gb|AAK00972.1|AC079736_12 putative homeodomain protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125587481|gb|EAZ28145.1| hypothetical protein OsJ_011628 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108710417|gb|ABF98212.1| Associated with HOX family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 642 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATYYSSPGN ERDSQAMYPA DSGNSSYPVP SAIGNMLYPG NGSSGPYTEF SGIIQHQQNF  60
   61 MELPGHPTAI SQDSSSREPN MVASYMDQRS FGPAKDMRNE MLMHLMDGAH NAGADLIHND 120
  121 THSSAQIEFG LLNNHNSMSV APAPGQGLSL SLNTHILAPS YPYWSAKTEL LTPHSYHGDD 180
  181 NRMKNMQSEA SQAIRNSKYL KAAQELLDEV VSVWKSIKQK AQKDQAEAGK SDNKEAEGGS 240
  241 KGEGVSSNPQ ESTANAAPEI SAAEKQELQN KMAKLMAMLD EVDRKYKHYY HQMQIVVSSF 300
  301 DMVAGSGAAK PYTAVALQTI SKHFRCLKDA INDQINVIRK KLGEEESSSG KEGKLTRLRY 360
  361 IDQQLRQQRA FQQYGLLQQN AWRPQRGLPE NSVSILRAWL FEHFLHPYPK DSEKLMLARQ 420
  421 TGLTRSQISN WFINARVRLW KPMIEDMYKE EIGEADLDSN SSSDNVPRSK DKIATSEDKE 480
  481 DLKSSMSQTY QPSQLGESKA NIGMMSLGGA PAGFHNEGNQ DDSFMNLMLK DQRPGEAEGS 540
  541 LLHDAVAHHS DENARFMAYH LSGLGRYGNS NVSLTLGLQH PDNRLSVQNT HQPGFAGAGE 600
  601 EIYNSTASLG VAAASSSDYE STNQIDQRQR FEPSPLMHDF VA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] deduced N/A No confident structure predictions are available.
    2 View Details [186..290] Pfam 7.823909 No description for PF07526.2 was found. No confident structure predictions are available.
    3 View Details [291..449] PSI-BLAST 15.154902 Oct-1 POU Homeodomain; Oct-1
    4 View Details [450..642] MSA 1.761992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle