| Protein: | gi|34897010, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 642 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34897010, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
453.0 | [0..1] | [642..1] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MATYYSSPGN ERDSQAMYPA DSGNSSYPVP SAIGNMLYPG NGSSGPYTEF SGIIQHQQNF 60
61 MELPGHPTAI SQDSSSREPN MVASYMDQRS FGPAKDMRNE MLMHLMDGAH NAGADLIHND 120
121 THSSAQIEFG LLNNHNSMSV APAPGQGLSL SLNTHILAPS YPYWSAKTEL LTPHSYHGDD 180
181 NRMKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [186-290] |
1 11 21 31 41 51
| | | | | |
1 MQSEASQAIR NSKYLKAAQE LLDEVVSVWK SIKQKAQKDQ AEAGKSDNKE AEGGSKGEGV 60
61 SSNPQESTAN AAPEISAAEK QELQNKMAKL MAMLDEVDRK YKHYY
|
| Detection Method: | |
| Confidence: | 7.823909 |
| Match: | PF07526.2 |
| Description: | No description for PF07526.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [291-449] |
1 11 21 31 41 51
| | | | | |
1 HQMQIVVSSF DMVAGSGAAK PYTAVALQTI SKHFRCLKDA INDQINVIRK KLGEEESSSG 60
61 KEGKLTRLRY IDQQLRQQRA FQQYGLLQQN AWRPQRGLPE NSVSILRAWL FEHFLHPYPK 120
121 DSEKLMLARQ TGLTRSQISN WFINARVRLW KPMIEDMYK
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 1cqtA |
| Description: | Oct-1 POU Homeodomain; Oct-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [450-642] |
1 11 21 31 41 51
| | | | | |
1 EEIGEADLDS NSSSDNVPRS KDKIATSEDK EDLKSSMSQT YQPSQLGESK ANIGMMSLGG 60
61 APAGFHNEGN QDDSFMNLML KDQRPGEAEG SLLHDAVAHH SDENARFMAY HLSGLGRYGN 120
121 SNVSLTLGLQ HPDNRLSVQN THQPGFAGAG EEIYNSTASL GVAAASSSDY ESTNQIDQRQ 180
181 RFEPSPLMHD FVA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
