Protein Overview: gi|113611845, gi...

General Information:
Name(s) found:	gi\|34906824 [NCBI NR] gi\|22296419 [NCBI NR] gi\|115473421 [NCBI NR] gi\|113611845 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|34906824\|ref\|NP_914759.1\| putative cytochrome c oxidase subunit 6b-1 [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|22296419\|dbj\|BAC10187.1\| putative cytochrome c oxidase subunit 6b-1 [Oryza sativa Japonica Group] [NCBI NR] gi\|115473421\|ref\|NP_001060309.1\| Os07g0621600 [Oryza sativa (japonica cultivar-group)] [NCBI NR] gi\|113611845\|dbj\|BAF22223.1\| Os07g0621600 [Oryza sativa (japonica cultivar-group)] [NCBI NR] putative cytochrome c oxidase subunit 6b-1 [Oryza sativa (japonica cultivar-group)]gi\|22296419\|dbj\|BAC10187.1\| putative cytochrome c oxidase subunit 6b-1 [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas] putative cytochrome c oxidase subunit 6b-1 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta] Os07g0621600 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
Organism:	Oryza sativa Japonica Group
Length:	174 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGEGKAPT LAAEEHTLPP HEVPVENSSS EKSSDNSVAE VVPEKDAETP AAQDTTSVVE  60
   61 DKSETPEMTA SSEKPEEEGS NAATEESNEA EEETIDEKPE IKIETAPADF RFPTTNQTRH 120
  121 CFTRYIEYHR CVAAKGEGAP ECEKFAKYYR SLCPSEWIER WNEQRENGTF PGPL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
cytochrome-c oxidase activity	8.77230386960109	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors	8.77230386960109	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor	8.77230386960109	bayes_pls_golite062009
heme-copper terminal oxidase activity	8.46183559370125	bayes_pls_golite062009
oxidoreductase activity	5.63278726556437	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	3.24364609265355	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	3.09509456823261	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	2.46771419705328	bayes_pls_golite062009
cation transmembrane transporter activity	2.2783820574886	bayes_pls_golite062009
catalytic activity	0.287695754348243	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..81]	MSA	2.066994	View MSA. No confident structure predictions are available.
2	View Details	[82..174]	PSI-BLAST	30.69897	Cytochrome c oxidase subunit h

Protein Overview: gi|113611845, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: