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Protein Overview: gi|50934375, gi|...

General Information:
Name(s) found: gi|50934375 [NCBI NR]
gi|50510100 [NCBI NR]
gi|33146796 [NCBI NR]
gi|215765911 [NCBI NR]
gi|115470725 [NCBI NR]
gi|113610497 [NCBI NR]
Description(s) found:
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  • gi|50934375|ref|XP_476715.1| SOH1-like protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50510100|dbj|BAD30771.1| SOH1-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|33146796|dbj|BAC79744.1| SOH1-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215765911|dbj|BAG98139.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115470725|ref|NP_001058961.1| Os07g0164600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113610497|dbj|BAF20875.1| Os07g0164600 [Oryza sativa Japonica Group] [NCBI NR]
  • SOH1-like protein [Oryza sativa (japonica cultivar-group)]gi|50510100|dbj|BAD30771.1| SOH1-like protein [Oryza sativa (japonica cultivar-group)]gi|33146796|dbj|BAC79744.1| SOH1-like protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os07g0164600 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • SOH1-like protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 202 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAEARPAP PDPNDARQRF LLELEFIQCL ANPTYIHYLA QNRYFEDEAF IGYLKYLKYW  60
   61 QRPEYIKYIM YPHCLFFLEL LQNANFRNAM AHPASKEVAH RQQYFFWKNY RNNRLKHILP 120
  121 RPPPEPTPTP APAPAAVPPS ASVPSTVVPP VAAPPSALLP MSAAGASAMS PMQFAGTPGT 180
  181 NIPKNDMRNV MGGQGGRKRK IG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] Pfam 69.387216 No description for PF05669.3 was found. No confident structure predictions are available.
    2 View Details [119..202] MSA 13.029997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle