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View Structure Prediction Details

Protein: gi|50934375, gi|...
Organism: Oryza sativa Japonica Group
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50934375, gi|....

Description E-value Query
Range
Subject
Range
gi|220944342, gi... - gi|220954132|gb|ACL89609.1| MED31-PA [synthetic construct], gi|220944342|gb|ACL84714.1| MED31-PA [sy...
FBpp0293855, MED... - The gene Mediator complex subunit 31 is referred to in FlyBase by the symbol Dmel\MED31 (CG1057, FBg...
252.0 [0..8] [161..10]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAEARPAP PDPNDARQRF LLELEFIQCL ANPTYIHYLA QNRYFEDEAF IGYLKYLKYW  60
   61 QRPEYIKYIM YPHCLFFLEL LQNANFRNAM AHPASKEVAH RQQYFFWKNY RNNRLKHI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 69.387216
Match: PF05669.3
Description: No description for PF05669.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPRPPPEPTP TPAPAPAAVP PSASVPSTVV PPVAAPPSAL LPMSAAGASA MSPMQFAGTP  60
   61 GTNIPKNDMR NVMGGQGGRK RKIG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle