YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|50922735, gi|...

General Information:
Name(s) found: gi|50922735 [NCBI NR]
gi|21742763 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|50922735|ref|XP_471728.1| OSJNBa0023J03.5 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|21742763|emb|CAD40519.1| OSJNBa0023J03.5 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1108 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPGAGAAA AAGGDGGGGA PPGAGAGGGA PGAGACAANN NTNGVNSASQ SSGGPFSGYI  60
   61 LLLFLFPLLA LYCYVPVPDI HDVSSMLLRY CYVLVPDIHN AHDAISMLLV MLHVVTRSPY 120
  121 TVYAMIIVLT FWIKICRFMT IFLTIQKPDR LFSVVGFAAA LKPHAFDGSN YKRWKARVLL 180
  181 WLTAMQCFYV SRGKRSEPPL SPEEEANFEA SDCLFCGALI SVLADNIVDV YMHMPSRKDM 240
  241 WDALEAKFGV SDTGSELYVM EQFYDYKMVD DRSVVEQAHE IQMLAKELEN NNCELPDKFV 300
  301 AGGIIAKLPP SWSDFATSLK HKRQEFSVSD LIGSLGVEEK ARAKDVRGKK VEGGSSANMV 360
  361 QKKNPHASHN NKKVKSDVKP KAATNFKKKG KGKAKGDCFV YGKYGHWAKD CPERKDRKSA 420
  421 NMVISEGGGT SVYGKILPTV LSIFHSPDWW VDTGANIHVG RGSSLLMGNG SLAVVHGVGT 480
  481 VDLKFTSGKT VQLKNVQHVP SIKKNLVSGS LLCREGFRLV FESNKCVVSK YGTFVGKGSK 540
  541 CHTCVQSKHP RKPHKTSEAR NLAPLELVHS DLCEMNGVLT KGGKKYFMTL IDDCTTFCYV 600
  601 YLLKTKDEAL HYFKIYKAEF GIIHERTPPY SPQSNGVVER KNRTLTEMVN AMLDTVGLSK 660
  661 EWWGEAVLTV CHVLNKIPMK HKEVTPFEEW ERKKLNLSYL RTWGCLAKVN VPIAKKQKLG 720
  721 PNTVDCVFLG YAIHSVGYRF LIVNSGVPDM HIGTIFESRD ATFFENEFPM KHTPSTSSQE 780
  781 TVMPHEHFAP IEHNDQTPEE NPEEDNIVDT RKSKRQRVAK SFGDDYIVYL VDDTPRTIEE 840
  841 AYSSPDADYW KEAVRSEMDS IMSNGTWEVV ERPYGCKPVG CKWVFKKKLR PDGTIEKYKT 900
  901 RLVAKMDVKT AFLNGELEEE IYMDQPDSLN VIEEVKDYLS KSFEMKDLGE ADVILNIKLQ 960
  961 RGDESGITLV QSHYVDKILS CFGYSDCKPT PTPYDPSVLL RKNRRIARDQ LRYYQIIGSL1020
 1021 MYLASATRPD ISFAVSKLSR FVSNPGDDHW QALERVIRYL KGIMSYGIHY TGYPKVLEGY1080
 1081 SDSNWISDAD EIKATSGYVF TLGGGAVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] MSA 3.137994 View MSA. No confident structure predictions are available.
    2 View Details [149..271] MSA 7.533994 View MSA. No confident structure predictions are available.
    3 View Details [272..470] MSA 3.626993 View MSA. No confident structure predictions are available.
    4 View Details [471..550] deduced N/A No confident structure predictions are available.
    5 View Details [551..749] Pfam 21.79588 No description for PF00665.18 was found. No confident structure predictions are available.
    6 View Details [750..825] deduced N/A No confident structure predictions are available.
    7 View Details [826..997] Pfam 30.366532 No description for PF07727.6 was found. No confident structure predictions are available.
    8 View Details [998..1108] MSA 5.710989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle