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View Structure Prediction Details

Protein: gi|50922735, gi|...
Organism: Oryza sativa Japonica Group
Length: 1108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|50922735, gi|....

Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPGAGAAA AAGGDGGGGA PPGAGAGGGA PGAGACAANN NTNGVNSASQ SSGGPFSGYI  60
   61 LLLFLFPLLA LYCYVPVPDI HDVSSMLLRY CYVLVPDIHN AHDAISMLLV MLHVVTRSPY 120
  121 TVYAMIIVLT FWIKICRFMT IFLTIQKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRLFSVVGFA AALKPHAFDG SNYKRWKARV LLWLTAMQCF YVSRGKRSEP PLSPEEEANF  60
   61 EASDCLFCGA LISVLADNIV DVYMHMPSRK DMWDALEAKF GVSDTGSELY VMEQFYDYKM 120
  121 VDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [272-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSVVEQAHEI QMLAKELENN NCELPDKFVA GGIIAKLPPS WSDFATSLKH KRQEFSVSDL  60
   61 IGSLGVEEKA RAKDVRGKKV EGGSSANMVQ KKNPHASHNN KKVKSDVKPK AATNFKKKGK 120
  121 GKAKGDCFVY GKYGHWAKDC PERKDRKSAN MVISEGGGTS VYGKILPTVL SIFHSPDWWV 180
  181 DTGANIHVGR GSSLLMGNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [471-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLAVVHGVGT VDLKFTSGKT VQLKNVQHVP SIKKNLVSGS LLCREGFRLV FESNKCVVSK  60
   61 YGTFVGKGSK CHTCVQSKHP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [551-749]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKPHKTSEAR NLAPLELVHS DLCEMNGVLT KGGKKYFMTL IDDCTTFCYV YLLKTKDEAL  60
   61 HYFKIYKAEF GIIHERTPPY SPQSNGVVER KNRTLTEMVN AMLDTVGLSK EWWGEAVLTV 120
  121 CHVLNKIPMK HKEVTPFEEW ERKKLNLSYL RTWGCLAKVN VPIAKKQKLG PNTVDCVFLG 180
  181 YAIHSVGYRF LIVNSGVPD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.79588
Match: PF00665.18
Description: No description for PF00665.18 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [750-825]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIGTIFESR DATFFENEFP MKHTPSTSSQ ETVMPHEHFA PIEHNDQTPE ENPEEDNIVD  60
   61 TRKSKRQRVA KSFGDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [826-997]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YIVYLVDDTP RTIEEAYSSP DADYWKEAVR SEMDSIMSNG TWEVVERPYG CKPVGCKWVF  60
   61 KKKLRPDGTI EKYKTRLVAK MDVKTAFLNG ELEEEIYMDQ PDSLNVIEEV KDYLSKSFEM 120
  121 KDLGEADVIL NIKLQRGDES GITLVQSHYV DKILSCFGYS DCKPTPTPYD PS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.366532
Match: PF07727.6
Description: No description for PF07727.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [998-1108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLLRKNRRIA RDQLRYYQII GSLMYLASAT RPDISFAVSK LSRFVSNPGD DHWQALERVI  60
   61 RYLKGIMSYG IHYTGYPKVL EGYSDSNWIS DADEIKATSG YVFTLGGGAV S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle