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Protein Overview: gi|108708671, gi...

General Information:
Name(s) found: gi|34896966 [NCBI NR]
gi|14018081 [NCBI NR]
gi|125586578 [NCBI NR]
gi|115453435 [NCBI NR]
gi|113548789 [NCBI NR]
gi|108708671 [NCBI NR]
Description(s) found:
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  • gi|34896966|ref|NP_909829.1| putative heat shock protein [Oryza sativa] [NCBI NR]
  • gi|14018081|gb|AAK52144.1|AC084380_17 putative heat shock protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125586578|gb|EAZ27242.1| hypothetical protein OsJ_11180 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115453435|ref|NP_001050318.1| Os03g0401200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548789|dbj|BAF12232.1| Os03g0401200 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108708671|gb|ABF96466.1| DnaJ domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • putative heat shock protein [Oryza sativa]gi|14018081|gb|AAK52144.1| putative heat shock protein [Oryza sativa] [nrdb_11152004_Chlamydomonas]
  • putative heat shock protein [Oryza sativa (japonica cultivar-group)] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • Os03g0401200 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • DnaJ domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 748 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECNKDEALR AKEIAERKFE SKDLQGAKKF ALKAQALFPG LEGIVQMITT LDLYLASEVL  60
   61 ISGEKDWYSI LSVESSADDE TLKKQYRKLV LQLHPDKNKS VGAEGAFKMV QEAWTVLSDK 120
  121 TKRALYDQKR KLMVLKRNTS QTNKASAAPG ASNGFYNFAA NAAASKVTRG NKQKAGPATS 180
  181 SVRQRPPPPP PPPRQAPAPP PAKPPTFWTS CNKCKMNYEY LKVYLNHNLL CPTCREPFLA 240
  241 QEVPMPPTES VHAVHDPNIS GANQNTNGSR NFQWGPFSRT AGAASATASS AAAAQAANVV 300
  301 HHTYEKVRRE REEAQAAARR EEALRRKYNP PKRQANISEN LNLGTGGNSS KKMRTMGNDI 360
  361 GIGSSSILSG SGANYFGVPG GNISFSTNSG AHHFQGVNGG FSWKPRPPTR ISLVKTFTQF 420
  421 DVRGILMEKA KSDLKDKLKE MQTKRSQVAA NGKKNKKNMF KESGGDDESL ASDDSTARQA 480
  481 AHVDPEDNAS VNSTDADDEN DDPLSYNVPD PDFHDFDKDR TEECFQSDQI WATYDDEDGM 540
  541 PRYYAFIQKV LSLEPFQLKI SFLTSRTNSE FGSLNWVSSG FTKTCGDFRI CRYETCDILN 600
  601 MFSHQIKWEK GPRGVIKIYP QKGNIWAVYR NWSPDWDEDT PDKVLHAYDV VEVLDEYDED 660
  661 LGISVIPLVK VAGFRTVFQR NQDLNAIKKI PKEEMFRFSH EVPFYRMSGE EAPNVPKDSY 720
  721 ELDPAAISKE LLQEITETVE SSKATSEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] MSA 1.319994 View MSA. No confident structure predictions are available.
    2 View Details [62..151] PSI-BLAST 19.221849 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [152..398] PSI-BLAST 35.69897 The crystal structure of Hsp40 Ydj1
    4 View Details [399..493] deduced N/A No confident structure predictions are available.
    5 View Details [494..620] deduced N/A No confident structure predictions are available.
    6 View Details [621..748] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.036672061154828 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle