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Protein Overview: gi|33576887, gi|...

General Information:
Name(s) found: gi|33602448 [NCBI NR]
gi|33576887 [NCBI NR]
Description(s) found:
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  • gi|33602448|ref|NP_890008.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella bronchiseptica RB50] [NCBI NR]
  • gi|33576887|emb|CAE33967.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella bronchiseptica RB50] [NCBI NR]
  • 3-demethylubiquinone-9 3-methyltransferase [Bordetella bronchiseptica RB50]gi|33576887|emb|CAE33967.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella bronchiseptica RB50] [nrdb_11152004_Chlamydomonas]
  • 3-demethylubiquinone-9 3-methyltransferase [Bordetella bronchiseptica RB50] [nr-271106-contam.fasta]
    • Organism: Bordetella bronchiseptica RB50
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYPYIEPVG PPTPAPMTTA TQSSAPGVNV DQAEVEKFSA LAARWWDPES EFKPLHAINP  60
   61 LRLGWIQETA GSLSGKRVLD VGCGGGILSE SMAVAGAQVT GIDLAEKSLK IARLHGLESG 120
  121 VKVDYRAVPV EELATEQPGQ YDVVTCMEML EHVPDPASVV RACAALAKPG GWVFFSTLNR 180
  181 NPKSFLFAIV GAEYVLRLLP RGTHSYDSFI KPSELAASAR QAGLEPTGMR GMEYNPITQV 240
  241 YSLSANTSVN YLMSTRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 24.154902 Crystal structure of Hma (MmaA4) from Mycobacterium tuberculosis, apo-form

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  1.07321114919891 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.612108481676679 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.606225212585352 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.14147363365106 bayes_pls_golite062009
  • binding
    		•  0.109975487409217 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle