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Protein Overview: gi|33574079

General Information:
Name(s) found: gi|33574079 [NCBI NR]
Description(s) found:
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  • gi|33574079|emb|CAE38403.1| electron transfer flavoprotein beta-subunit [Bordetella parapertussis] [NCBI NR]
  • electron transfer flavoprotein beta-subunit [Bordetella bronchiseptica RB50]gi|33597651|ref|NP_885294.1| electron transfer flavoprotein beta-subunit [Bordetella parapertussis 12822]gi|33576869|emb|CAE33949.1| electron transfer flavoprotein beta-subunit [nrdb_11152004_Chlamydomonas]
  • electron transfer flavoprotein beta-subunit [Bordetella parapertussis] [nr-271106-contam.fasta]
    • Organism: Bordetella parapertussis
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRVSPGNY CYFGDCWMKV LVPVKRVVDY NVKVRVKSDQ TGVDIANVKM SMNPFDEIAV  60
   61 EEATRLKEKG AVAEVVAVSC GAAQCQETLR TAMAIGADRA VLVQTDAELQ PLAVAKLLKA 120
  121 LVDKEQPQLV ILGKQAIDDD ANQTGQMLAA LLDWPQATFA SKVELGDGQV TVTREVDGGL 180
  181 ETLSLNLPAI VTTDLRLNEP RYVTLPNIMK AKKKPLETVS PQDLGVDPAP RLKTLKVSEP 240
  241 PARQAGIKVP DVATLVDKLK NEAKVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 77.522879 Small, beta subunit of electron transfer flavoprotein ETFP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.91619517870463 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.38436645708366 bayes_pls_golite062009
  • DNA binding
    		•  1.35936746868519 bayes_pls_golite062009
  • ligase activity
    		•  1.13489674466232 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.883268134837366 bayes_pls_golite062009
  • catalytic activity
    		•  0.828867994386867 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.724532065311415 bayes_pls_golite062009
  • electron carrier activity
    		•  0.40873603017227 bayes_pls_golite062009
  • transferase activity
    		•  0.40273889227698 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle