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Protein Overview: Y1029_STRPN

General Information:
Name(s) found: Y1029_STRPN [Swiss-Prot]
Description(s) found:
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  • gi|66879299|ref|ZP_00404323.1| COG2265: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Streptococcus pneumoniae TIGR4] [NCBI NR]
  • gi|15900900|ref|NP_345504.1| RNA methyltransferase [Streptococcus pneumoniae TIGR4] [NCBI NR]
  • gi|14972502|gb|AAK75144.1| RNA methyltransferase, TrmA family [Streptococcus pneumoniae TIGR4] [NCBI NR]
  • gi|111658257|ref|ZP_01408949.1| hypothetical protein SpneT_02000571 [Streptococcus pneumoniae TIGR4] [NCBI NR]
  • Uncharacterized RNA methyltransferase SP_1029 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=SP_1029 PE=3 SV=1 [Swiss-Prot]
  • RNA methyltransferase, TrmA family [Streptococcus pneumoniae TIGR4]gi|14972502|gb|AAK75144.1| RNA methyltransferase, TrmA family [Streptococcus pneumoniae TIGR4]gi|25388786|pir||G95118 RNA methyltransferase, TrmA family [imported] - Streptococcus pneumo [nrdb_11152004_Chlamydomonas]
  • RNA methyltransferase, TrmA family [Streptococcus pneumoniae TIGR4] [nr-271106-contam.fasta]
  • hypothetical protein SpneT_02000571 [Streptococcus pneumoniae TIGR4] [nr-271106-contam.fasta]
    • Organism: Streptococcus pneumoniae TIGR4
    Length: 543 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKNDIVEV EIVDLTHEGA GVAKVDGLVF FVENALPSEK ILMRVLKVNK KIGFGKVEKY  60
   61 LVQSPHRNQD LDLAYLRSGI ADLGHLSYPE QLKFKTKQVK DSLYKIAGIA DVEVAETLGM 120
  121 EHPVKYRNKA QVPVRRVNGV LETGFFRKNS HNLMPLEDFF IQDPVIDQVV VALRDLLRRF 180
  181 DLKPYDEKEQ SGLIRNLVVR RGHYSGQIMV VLVTTRPKVF RVDQLIEQVI KQFPEIVSVM 240
  241 QNINDQNTNA IFGKEWRTLY GQDYITDQML GNDFQIAGPA FYQVNTEMAE KLYQTAIDFA 300
  301 ELKKDDVIID AYSGIGTIGL SVAKHVKEVY GVELIPEAVE NSQKNASLNK ITNAHYVCDT 360
  361 AENAMKKWLK EGIQPTVILV DPPRKGLTES FIKASAQTGA DRIAYISCNV ATMARDIKLY 420
  421 QELGYELKKV QPVDLFPQTH HVETVALLSK LDVDKHISVE IELDEMDLTS AESKATYAQI 480
  481 KEYVWNKFEL KVSTLYIAQI KKKCGIELRE HYNKSKKDKQ IIPQCTPEKE EAIMDALRHF 540
  541 KMI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..441] PSI-BLAST 78.522879 Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase
    2 View Details [442..543] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methyltransferase activity
    		•  4.15445027778357 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  4.09362182773099 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.07153733729662 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  3.07428840534971 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  3.0539218951403 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  3.01384869242051 bayes_pls_golite062009
  • transferase activity
    		•  2.22303238506686 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  1.95598912777096 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  1.90505369820945 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  1.83964463328968 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  1.75675289134467 bayes_pls_golite062009
  • DNA-methyltransferase activity
    		•  1.63765148226572 bayes_pls_golite062009
  • arginine N-methyltransferase activity
    		•  1.6030970825293 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
    		•  1.6030970825293 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  1.33037840597912 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  1.33037840597912 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  1.32901977260571 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  1.10713374933008 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
    		•  1.05897361334523 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
    		•  0.703178429468566 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
    		•  0.639377525568296 bayes_pls_golite062009
  • ligase activity
    		•  0.477367693545833 bayes_pls_golite062009
  • O-methyltransferase activity
    		•  0.250946859465502 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  0.203168546434167 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
    		•  0.130104080746388 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
    		•  0.130042730841119 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.00505175337890207 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle