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Protein Overview: gi|25302298, gi|...

General Information:
Name(s) found: gi|25302298 [NCBI NR]
gi|25302297 [NCBI NR]
Description(s) found:
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  • pir||AB2577 conserved hypothetical protein Atu0001 [imported] - Agrobacterium tumefaciens (strain C58, Dupont) [NCBI NR]
  • pir||A97359 hypothetical 30.3K protein in glyS-dnaG/dnaE intergenic region [imported] - Agrobacterium tumefaciens (strain C58, Cereon) [NCBI NR]
  • AGR_C_5142p [Agrobacterium tumefaciens str. C58]gi|17933926|ref|NP_530716.1| hypothetical protein Atu0001 [Agrobacterium tumefaciens str. C58]gi|17738317|gb|AAL41032.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]gi|15154859|gb|A [nrdb_11152004_Chlamydomonas]
    • Organism: Agrobacterium tumefaciens
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKKSFFHL HLISDSTGET LMSAGRAVSA QFHTSMPVEH VYPMIRNQKQ LAQVIDLIDK  60
   61 EPGIVLYTIV DQQLAEFLDL RCHAIGVPCV NVLEPIIGIF QTYLGAPSRR RVGAQHALNA 120
  121 DYFARIEALN FAMDHDDGQM PETYDDADVV IIGISRTSKT PTSIYLANRG IKTANIPVVP 180
  181 NVPLPESLYA ATRPLIVGLV ATSDRISQVR ENRDLGTTGG FDGGRYTDRA TIMEELKYAR 240
  241 ALCARNNWPL IDVTRRSIEE TAAAILALRP RTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] Pfam 14.221849 No description for PF03618.5 was found. Confident ab initio structure predictions are available.
    2 View Details [135..273] FFAS03 1.04 No description for 2iyqA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.301700930786307 bayes_pls_golite062009
  • catalytic activity
    		•  0.176212702885001 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle