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Protein Overview: gi|50085463, gi|...

General Information:
Name(s) found: gi|50085463 [NCBI NR]
gi|49531439 [NCBI NR]
Description(s) found:
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  • gi|50085463|ref|YP_046973.1| host factor I for bacteriophage Q beta replication, a growth-related protein [Acinetobacter sp. ADP1] [NCBI NR]
  • gi|49531439|emb|CAG69151.1| host factor I for bacteriophage Q beta replication, a growth-related protein [Acinetobacter sp. ADP1] [NCBI NR]
  • host factor I for bacteriophage Q beta replication, a growth-related protein [Acinetobacter sp. ADP1]gi|49531439|emb|CAG69151.1| host factor I for bacteriophage Q beta replication, a growth-related protein [Acinetobacter sp. ADP1] [nrdb_11152004_Chlamydomonas]
  • host factor I for bacteriophage Q beta replication, a growth-related protein [Acinetobacter sp. ADP1] [nr-271106-contam.fasta]
    • Organism: Acinetobacter sp. ADP1
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGQTLQDP FLNSLRKERI PVSIFLVNGI KLQGHIESFD QYVVLLKNTV SQMVYKHAIS  60
   61 TVVPARNPRP AGAPTGAPQG GGFGGQGGGF GGQGGGFGGQ GGGFGGQGGG FGGQGTGFGG 120
  121 QGGGFGGQGG FGGQGGFGGQ GGFGGQGGFG GQGGSGFDND TKFEDGQEDD SNNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] PSI-BLAST 27.154902 Hfq protein from Pseudomonas aeruginosa. Low-salt crystals
    2 View Details [77..174] FFAS03 1.97 Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
    		• 3.35169246976368 bayes_pls_golite062009
  • RNA binding
    		•  2.84369313702118 bayes_pls_golite062009
  • binding
    		•  1.87128744333088 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.77149720854225 bayes_pls_golite062009
  • catalytic activity
    		•  0.312834499620126 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle