| Protein: | gi|50085463, gi|... |
| Organism: | Acinetobacter sp. ADP1 |
| Length: | 174 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50085463, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
138.0 | [0..1] | [170..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MSKGQTLQDP FLNSLRKERI PVSIFLVNGI KLQGHIESFD QYVVLLKNTV SQMVYKHAIS 60
61 TVVPARNPRP AGAPTG
|
| Detection Method: |  |
| Confidence: | 27.154902 |
| Match: | 1u1sA |
| Description: | Hfq protein from Pseudomonas aeruginosa. Low-salt crystals |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3.35169246976368 | bayes_pls_golite062009 | |
| RNA binding | 2.84369313702118 | bayes_pls_golite062009 |
| binding | 1.87128744333088 | bayes_pls_golite062009 |
| nucleic acid binding | 1.77149720854225 | bayes_pls_golite062009 |
| catalytic activity | 0.312834499620126 | bayes_pls_golite062009 |
|
Region A: Residues: [77-174] |
1 11 21 31 41 51
| | | | | |
1 APQGGGFGGQ GGGFGGQGGG FGGQGGGFGG QGGGFGGQGT GFGGQGGGFG GQGGFGGQGG 60
61 FGGQGGFGGQ GGFGGQGGSG FDNDTKFEDG QEDDSNNR
|
| Detection Method: | |
| Confidence: | 1.97 |
| Match: | 1wckA |
| Description: | Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore. |
Matching Structure (courtesy of the PDB): |
|
