Protein Overview: gi|54310323, gi|...

General Information:
Name(s) found:	gi\|54310323 [NCBI NR] gi\|46914764 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|54310323\|ref\|YP_131343.1\| putative ubiquinol-cytochrome c reductase,iron-sulfur subunit [Photobacterium profundum SS9] [NCBI NR] gi\|46914764\|emb\|CAG21541.1\| putative ubiquinol-cytochrome c reductase,iron-sulfur subunit [Photobacterium profundum SS9] [NCBI NR]
Organism:	Photobacterium profundum SS9
Length:	196 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNAPVSNGR RRFLTATTSV VGGLGAVAVA VPFIKSWNPS ARAKAAGAPV EVDISKLEDG  60
   61 QMVRVEWRGK PVWVVRRGDA ILKELGEHDA QLRDPNSDEP QQPTYAHNKF RSVKPEIFLA 120
  121 VGICTHLGCS PTYLPDSFSE QVSGVSSGFF CPCHGSKFDM AGRVFAGVPA PLNLVVPPHM 180
  181 FVSDHSIIIG IDEGAA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..196]	PSI-BLAST	43.0	ISP subunit of the mitochondrial cytochrome bc1-complex, watersoluble domain; Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
ubiquinol-cytochrome-c reductase activity	9.65724929491711	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor	9.65724929491711	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors	9.125468664417	bayes_pls_golite062009
oxidoreductase activity	6.05060612159037	bayes_pls_golite062009
electron carrier activity	5.20213585732279	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	4.21571853217094	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	4.06768260706614	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	3.42417427779305	bayes_pls_golite062009
cation transmembrane transporter activity	3.16998920469705	bayes_pls_golite062009
ion transmembrane transporter activity	2.96169692239126	bayes_pls_golite062009
catalytic activity	0.746741393172769	bayes_pls_golite062009
iron-sulfur cluster binding	0.71220774812099	bayes_pls_golite062009
metal cluster binding	0.71220774812099	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.0925221440840771	bayes_pls_golite062009
substrate-specific transporter activity	0.00797690232905524	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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