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Protein Overview: gi|46913930, gi|...

General Information:
Name(s) found: gi|54309494 [NCBI NR]
gi|46913930 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|54309494|ref|YP_130514.1| putative biotin synthesis protein BioC [Photobacterium profundum SS9] [NCBI NR]
  • gi|46913930|emb|CAG20712.1| putative biotin synthesis protein BioC [Photobacterium profundum SS9] [NCBI NR]
    • Organism: Photobacterium profundum SS9
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNEVNAVTH DKAELKTNDI PRIDKQAVAE AFGRAAKHYD KAAAFQRIVG HQLLERLPAV  60
   61 IPTGTRVLDL GCGTGYFSEQ LMQRGYDVSA ADLSIEMLAQ AKSRCGDSVT YLEADAENLP 120
  121 IDDNQFDVAF SSLALQWCDD LSVPLKELRR VVKPDGKIMF TTLVEGSLFE LSQAWQEVDR 180
  181 YQHVNHFLSQ KAIKLALAQA GGAIDTLDFK PIRVNYPAAV GLMKDLKGIG ATHLPQGRKA 240
  241 GLAGRKTIMA LESAYNEFRD ENGQLPATYQ VCFGVIIND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 24.522879 Crystal structure of Ubiquinone/menaquinone biosynthesis methyltransferase-related protein (tm1389) from THERMOTOGA MARITIMA at 2.35 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.62377578202456 bayes_pls_golite062009
  • transferase activity
    		•  1.27388514102581 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.11446137064593 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.0967819849268 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.495483488913306 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle