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View Structure Prediction Details

Protein: gi|46913930, gi|...
Organism: Photobacterium profundum SS9
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46913930, gi|....

Description E-value Query
Range
Subject
Range
gi|90324431, gi|... - gi|90414523|ref|ZP_01222498.1| putative biotin synthesis protein BioC [Photobacterium profundum 3TCK...
239.0 [0..1] [279..1]

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Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNEVNAVTH DKAELKTNDI PRIDKQAVAE AFGRAAKHYD KAAAFQRIVG HQLLERLPAV  60
   61 IPTGTRVLDL GCGTGYFSEQ LMQRGYDVSA ADLSIEMLAQ AKSRCGDSVT YLEADAENLP 120
  121 IDDNQFDVAF SSLALQWCDD LSVPLKELRR VVKPDGKIMF TTLVEGSLFE LSQAWQEVDR 180
  181 YQHVNHFLSQ KAIKLALAQA GGAIDTLDFK PIRVNYPAAV GLMKDLKGIG ATHLPQGRKA 240
  241 GLAGRKTIMA LESAYNEFRD ENGQLPATYQ VCFGVIIND

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Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 2avnA
Description: Crystal structure of Ubiquinone/menaquinone biosynthesis methyltransferase-related protein (tm1389) from THERMOTOGA MARITIMA at 2.35 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.62377578202456 bayes_pls_golite062009
transferase activity 1.27388514102581 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 1.11446137064593 bayes_pls_golite062009
methyltransferase activity 1.0967819849268 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.495483488913306 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle