Protein Overview: gi|54308453, gi|...

General Information:
Name(s) found:	gi\|54308453 [NCBI NR] gi\|46912882 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|54308453\|ref\|YP_129473.1\| putative nitrite reductase, Fe-S protein (NrfC) [Photobacterium profundum SS9] [NCBI NR] gi\|46912882\|emb\|CAG19671.1\| putative nitrite reductase, Fe-S protein (NrfC) [Photobacterium profundum SS9] [NCBI NR]
Organism:	Photobacterium profundum SS9
Length:	230 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCSRRNFLA GAGAVIFTTG VSAGSGVLGR QSLVATMDDG VKRYGMVHDE TLCIGCTACT  60
   61 DACREVNKVP EGVSRLEIVR SEPQGEYPDV SYQFTRISCQ HCDNAPCVHV CPTGASFKDP 120
  121 DTGIVDVDPF KCVGCGYCLA ACPYKVRFFN PETKSADKCD FCRKTNLKEG KLPACVESCP 180
  181 TKSLTFGDLN DPNSEVSKLL EQKTVYRQKV ELGTSPKLYK VPYGKGEIKG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..230]	PSI-BLAST	30.69897	Formate dehydrogenase N, iron-sulfur (beta) subunit; Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
formate dehydrogenase activity	10.9674358961972	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.77927347135001	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors	5.39747453448396	bayes_pls_golite062009
electron carrier activity	5.05393703018095	bayes_pls_golite062009
oxidoreductase activity	4.9376838739291	bayes_pls_golite062009
NADH dehydrogenase activity	4.33237073012425	bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity	4.11385247295551	bayes_pls_golite062009
NADH dehydrogenase (quinone) activity	4.01604464286682	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	3.37009759734389	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH	2.37284861281746	bayes_pls_golite062009
4 iron, 4 sulfur cluster binding	1.5619384041388	bayes_pls_golite062009
iron-sulfur cluster binding	1.30496569995148	bayes_pls_golite062009
metal cluster binding	1.30496569995148	bayes_pls_golite062009
catalytic activity	0.488483980994331	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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