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Protein Overview: gi|54307600, gi|...

General Information:
Name(s) found: gi|54307600 [NCBI NR]
gi|46912023 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|54307600|ref|YP_128620.1| aromatic acid decarboxylase [Photobacterium profundum SS9] [NCBI NR]
  • gi|46912023|emb|CAG18818.1| putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Photobacterium profundum SS9] [NCBI NR]
    • Organism: Photobacterium profundum SS9
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDKRITLAW TGASGAPYGL RLLECLLAAD YHVYLLISSA ARVVLATEHG LKLPTGPDAA  60
   61 KAILVEHLQC DASQLSVCGK DDWFSPVASG SAAPKKMVIC PCSAGTLASV AHGMSDNLIE 120
  121 RAADVVMKER GQLLMVVRET PFSTLHLENM LKLSKMGVTI MPAAPGFYHQ PESIDDLVDF 180
  181 MVARMLDHLG IEQGLVPRWG YDQRKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] PSI-BLAST 57.30103 Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
    		•  5.88631349530005 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  2.27469953971238 bayes_pls_golite062009
  • catalytic activity
    		•  1.88716391063227 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.67751595868044 bayes_pls_golite062009
  • phosphopantothenoylcysteine decarboxylase activity
    		•  1.6488492075417 bayes_pls_golite062009
  • lyase activity
    		•  0.646446561158526 bayes_pls_golite062009
  • phosphopantothenate--cysteine ligase activity
    		•  0.35505046579356 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle