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Protein Overview: gi|71898242, gi|...

General Information:
Name(s) found: gi|71901128 [NCBI NR]
gi|71898242 [NCBI NR]
gi|71731981 [NCBI NR]
gi|71729092 [NCBI NR]
gi|22996905 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|71901128|ref|ZP_00683234.1| Integration host factor, alpha subunit [Xylella fastidiosa Ann-1] [NCBI NR]
  • gi|71898242|ref|ZP_00680416.1| Integration host factor, alpha subunit [Xylella fastidiosa Ann-1] [NCBI NR]
  • gi|71731981|gb|EAO34038.1| Integration host factor, alpha subunit [Xylella fastidiosa Ann-1] [NCBI NR]
  • gi|71729092|gb|EAO31217.1| Integration host factor, alpha subunit [Xylella fastidiosa Ann-1] [NCBI NR]
  • ref|ZP_00041147.1| COG0776: Bacterial nucleoid DNA-binding protein [Xylella fastidiosa Ann-1] [NCBI NR]
    • Organism: Xylella fastidiosa subsp. sandyi Ann-1
    Length: 99 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTKAEMVE RLFDEVGLNK REAKEFVDAF FDLLRDALEQ GKEIKLSGFG NFELRCKNQR  60
   61 PGRNPKTGEE IPISARTVVT FRSGQKLKER VDAYVGSRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] PSI-BLAST 29.30103 Integration host factor alpha subunit (IHFA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA binding
    		•  5.25387001942839 bayes_pls_golite062009
  • nucleic acid binding
    		•  5.15205953864352 bayes_pls_golite062009
  • binding
    		•  3.99545980559645 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.74311685689448 bayes_pls_golite062009
  • transcription activator activity
    		•  0.38454381783388 bayes_pls_golite062009
  • protein binding
    		•  0.262917207132993 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.176747764275359 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle