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Protein Overview: gi|18422356, gi|...

General Information:
Name(s) found: gi|34098821 [NCBI NR]
gi|28058769 [NCBI NR]
gi|18422356 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|34098821|gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] [NCBI NR]
  • gi|28058769|gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18422356|ref|NP_568626.1| transport protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 794 amino acids

    Gene Ontology:
    Cellular Component: COPII vesicle coat [IEA]
    Biological Process: ER to Golgi vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    transport [ISS]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLELEAIE GLRWSWNSWP TTKSDCESLV VPLSIMYTPL MHFSELPTIP YDPLICSRCG  60
   61 AVLNPYARVD YQSRIWSCPF CFHKNLFPRS YSGITETNLP AELFPTYSAV EYSPLPSRQS 120
  121 GSNTTTPTAA ASWSNGFNQG VRSMPSNSSF SSLASSTVGG GGGVISELGP AFVFVVDASM 180
  181 VEDELRAVRS DVLFVIEQLP ENCLVALITF DSMVRVYDLG FSECSKVVVF HGERDLSPDQ 240
  241 IQQFLGLGYS KQFHHGKMSA IRKQSFLLPL VECEFNLTSA FEEIIPLVDV KPGHRPHRST 300
  301 GAAISTALGL LEGCSVTTGS RIMVFTSGPA TRGPGIIVDS DLSNSIRTHR DIITGHVSYY 360
  361 DKSCGFYKKL AKRLCDSSVV LDVFACSLDQ VGAAELRYAV EMSGGFLLLG ETFESEQFKK 420
  421 CLRHIFIRDA DGNLSMYFDV SLEVVTTKDM RICGALGPVV SLRQKNDIVS ETEIGEGGTY 480
  481 MWKTSTVTNK TCVSFFFHVS NEQNRKPQPG SAFFIQFITR YRYGNGAMRK RVTTVARRWV 540
  541 AGKSPEISSS FDQETAASVM ARLAINRAEE CHARDVITWL DNGLIRFASR FGDYIQEDPS 600
  601 SFRLTPNFSL YPQFMFYLRR SQFLDVFNNS PDETGFFRLM LNREGVVNSI IMIQPTLLRY 660
  661 SFDGPPVPVL LDIRSVTPDV ILLFDSYFYV VIHHGSKIAQ WRKLEYHKDP SHETFRNLLE 720
  721 APEIDAAQLV TDRIPMPRIV RCDQHGSQAR FLLAKLNPSV TQKTDHTGGS DIVLTDDMSL 780
  781 QDFLEDLQSL AVKG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..794] PSI-BLAST 1000.0 No description for 2nupA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle