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Protein Overview: ERCC2_ARATH

General Information:
Name(s) found: ERCC2_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • DNA repair helicase XPD OS=Arabidopsis thaliana GN=XPD PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 758 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: DNA repair [IMP]
    response to heat [IMP]
    response to UV [IMP]
    Molecular Function: nucleic acid binding [IEA]
    DNA binding [IEA]
    ATP binding [IEA]
    hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [IEA]
    ATP-dependent helicase activity [IEA]
    ATP-dependent DNA helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKIEDVTV YFPYDNIYPE QYEYMVELKR ALDAKGHCLL EMPTGTGKTI ALLSLITSYR  60
   61 LSRPDSPIKL VYCTRTVHEM EKTLGELKLL HDYQVRHLGT QAKILALGLS SRKNLCVNTK 120
  121 VLAAENRDSV DAACRKRTAS WVRALSTENP NVELCDFFEN YEKAAENALL PPGVYTLEDL 180
  181 RAFGKNRGWC PYFLARHMIQ FANVIVYSYQ YLLDPKVAGF ISKELQKESV VVFDEAHNID 240
  241 NVCIEALSVS VRRVTLEGAN RNLNKIRQEI DRFKATDAGR LRAEYNRLVE GLALRGDLSG 300
  301 GDQWLANPAL PHDILKEAVP GNIRRAEHFV HVLRRLLQYL GVRLDTENVE KESPVSFVSS 360
  361 LNSQAGIEQK TLKFCYDRLQ SLMLTLEITD TDEFLPIQTV CDFATLVGTY ARGFSIIIEP 420
  421 YDERMPHIPD PILQLSCHDA SLAIKPVFDR FQSVVITSGT LSPIDLYPRL LNFTPVVSRS 480
  481 FKMSMTRDCI CPMVLTRGSD QLPVSTKFDM RSDPGVVRNY GKLLVEMVSI VPDGVVCFFV 540
  541 SYSYMDGIIA TWNETGILKE IMQQKLVFIE TQDVVETTLA LDNYRRACDC GRGAVFFSVA 600
  601 RGKVAEGIDF DRHYGRLVVM YGVPFQYTLS KILRARLEYL HDTFQIKEGD FLTFDALRQA 660
  661 AQCVGRVIRS KADYGMMIFA DKRYSRHDKR SKLPGWILSH LRDAHLNLST DMAIHIAREF 720
  721 LRKMAQPYDK AGTMGRKTLL TQEDLEKMAE TGVQDMAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..423] PSI-BLAST 12.30103 No description for 2i4iA was found.
    2 View Details [424..758] FFAS03 0.984 No description for 2ocaA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle