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Protein Overview: gi|34365725, gi|...

General Information:
Name(s) found: gi|34365725 [NCBI NR]
gi|30695777 [NCBI NR]
gi|27311753 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|34365725|gb|AAQ65174.1| At5g49900 [Arabidopsis thaliana] [NCBI NR]
  • gi|30695777|ref|NP_199801.2| catalytic/ glucosylceramidase [Arabidopsis thaliana] [NCBI NR]
  • gi|27311753|gb|AAO00842.1| putative protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 957 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [IEA]
    Biological Process: glucosylceramide catabolic process [IEA]
    sphingolipid metabolic process [IEA]
    Molecular Function: glucosylceramidase activity [IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEEKIMDIG EDVKPLNSSD TKVDPAVPAS LTWQRKIDSD VKAPREFNLS VKEIFQLAPV  60
   61 GIRLWFLCRE EAAKGRLAFI DPFSKHSVTS SHGVPLGGIG AGSIGRSFKG EFQRWQLFPP 120
  121 KCEDEPVLAN QFSAFVSRAN GKKYSSVLCP RNPKLDKQDS ESGIGSWDWN LKGDKSTYHA 180
  181 LYPRSWTMYE GEPDPELRIV CRQVSPFIPH NYKESSFPVS VFTFTLHNLG NTTADVTLLF 240
  241 TWANSVGGDS EFSGGHYNSK ITMNDGVQGV LLHHKTANGL PSLSYAISAQ ATDGVSVSAC 300
  301 PFFIVSGKQD GITAKDMWQA VKENGSFDHL KASEASMQSD HGSSIGAAVA ASVTVLPGES 360
  361 RIVTFSLAWD CPEVQFPSGK IYSRRYTKFY GNNGDAAAQI AHDAILGHSQ WESWIEDWQR 420
  421 PILEDKRLPA WYPVTLFNEL YYLNSGGTLW TDGSSPVHSL AGVREKKFSL DKSQLGLKND 480
  481 IDVPHQNDTA VSVLEKMAST LEELHASTTS NSAFGTKLLE EGEENIGHFL YLEGIEYRMW 540
  541 NTYDVHFYAS FALVMLFPKL ELSIQRDFAA AVMLHDPTKV KTLSEGQWVQ RKVLGAVPHD 600
  601 LGINDPWFEV NGYTLHNTDR WKDLNPKFVL QVYRDVVATG DKKFASAVWP SVYVAMAYMA 660
  661 QFDKDGDGMI ENEGFPDQTY DTWSASGVSA YCGGLWVAAL QAASALARVV GDKNSQDYFW 720
  721 SKFQKAKVVY EKKLWNGSYF NYDNSGSQYS STIQADQLAG QWYARASGLL PIVDEDKART 780
  781 ALEKVYNYNV MKIKDGKRGA VNGMHPNGKV DTASMQSREI WSGVTYALSA TMIQEGLVEM 840
  841 AFQTASGIYE AAWSETGLGY SFQTPESWNT VDEYRSLTYM RPLAIWAMQW ALTKTSQKQE 900
  901 QLGLEPEQQE PELEPSSSMK HDIGFSRVSR LLSLPNEASA KSTLQTLFDY TCRRMMS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] MSA 2.04098 View MSA. No confident structure predictions are available.
    2 View Details [139..243] deduced N/A No confident structure predictions are available.
    3 View Details [244..957] PSI-BLAST 65.30103 Crystal structure of Vibrio proteolyticus chitobiose phosphorylase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle