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Protein Overview: gi|23465401, gi|...

General Information:
Name(s) found: gi|23465401 [NCBI NR]
gi|23326048 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|23465401|ref|NP_696004.1| glycosyltransferase [Bifidobacterium longum NCC2705] [NCBI NR]
  • gi|23326048|gb|AAN24640.1| possible glycosyltransferase [Bifidobacterium longum NCC2705] [NCBI NR]
    • Organism: Bifidobacterium longum NCC2705
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVDILTREY PPHVYGGAGV HAEELSKVLA ERIDVTVRAF DGKRTEADIP AIPNAADAKG  60
   61 SLKVVGYDTP SELADANPAL KTFGVDLQIA NDVDADIIHA HTWYACLAGY MAKMLHGTPL 120
  121 VITAHSLEPF RPWKREQLGG GYNLSSWAEK DAYEHADRVI AVSGGMRKDI LTAYPNLDPD 180
  181 KVVVVYNGIT MADFATPAPD DPGWKVFDRY NIDRSKPTLL FVGRITRQKG LPYLLKALHL 240
  241 ISKDIQVVLC AGAPDTPEIA EEVKTAFAKL DEERGNIVWI EEMLPKPELN ALEHGCDAFI 300
  301 CPSIYEPLGI VNLEAMACGL PVVASATGGI PEVVVDGETG YLVPIDQLHD GTGTPTDPDK 360
  361 FVHDMAAAID KIMADPELAK KMGQAGYERA RDVFSWETIA DKTVEVYQSV LDEQKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..416] PSI-BLAST 52.39794 Structure of glycogen synthase from Pyrococcus abyssi

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring hexosyl groups
    		•  3.04530122157712 bayes_pls_golite062009
  • catalytic activity
    		•  3.02192459767177 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.94500176353224 bayes_pls_golite062009
  • glycogen phosphorylase activity
    		•  2.09116455393465 bayes_pls_golite062009
  • lipopolysaccharide heptosyltransferase activity
    		•  2.03374890992046 bayes_pls_golite062009
  • glucosyltransferase activity
    		•  1.8062586862583 bayes_pls_golite062009
  • transferase activity
    		•  1.67770954408305 bayes_pls_golite062009
  • UDP-N-acetylglucosamine 2-epimerase activity
    		•  1.63103907245982 bayes_pls_golite062009
  • UDP-glucosyltransferase activity
    		•  1.4199532885636 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.30934991061674 bayes_pls_golite062009
  • glycogen (starch) synthase activity
    		•  0.435616523537281 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.431662083250969 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.27693350081385 bayes_pls_golite062009
  • alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
    		•  0.22009679964126 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle