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Protein Overview: gi|110736628, gi...

General Information:
Name(s) found: gi|42566406 [NCBI NR]
gi|33589696 [NCBI NR]
gi|110736628 [NCBI NR]
Description(s) found:
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  • gi|42566406|ref|NP_192802.2| IQD16 (IQ-domain 16); calmodulin binding [Arabidopsis thaliana] [NCBI NR]
  • gi|33589696|gb|AAQ22614.1| At4g10640 [Arabidopsis thaliana] [NCBI NR]
  • gi|110736628|dbj|BAF00278.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • At4g10640 [Arabidopsis thaliana]gi|42566406|ref|NP_192802.2| calmodulin-binding family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Calmodulin-binding family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: IQD16 | IQD16 (IQ-domain 16); calmodulin binding | chr4:6571995-6574308 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • calmodulin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g10640 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: IQD16 | IQ-domain 16 | chr4:6571999-6574312 FORWARD LENGTH=423 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g10640 OS=Arabidopsis thaliana GN=IQD16 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: calmodulin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKNGTSWF TAVKKILWSP SKDSDKKTHH HKETDIKRKE KKGWIFRKTK LETTNSVLQH  60
   61 TVRTVEAEEK EKPPVIVSSV EEGVTEIVKL TATPGFIRRH WAAIIIQTAF RGYLSRRALR 120
  121 ALKGIVKLQA LVRGNNVRNQ AKLTLRCIKA LVRVQDQVLN HHQQQRSRVL LSPPSRNYNI 180
  181 EARRNSMFAE SNGFWDTKTY LQDIRSRRSL SRDMNRCNNE FYSEETELIL QKKLEIAIKR 240
  241 EKAQALALSN QIRSRSSRNQ SAGDDRELLE RTQWLDRWMA TKQWDDTITN STNVRDPIKT 300
  301 LEAVTTHHHQ RSYPATPPSC RASRSVMVRS ASPRIPCSPS SMQPNYMSAT ESAKAKARTQ 360
  361 STPRRRPMTA KKRLCYAEEE SLRSPSFKSC LWGDHESDYS CCYGDGFAGK ISPCSTTELR 420
  421 WLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] PSI-BLAST 47.39794 No description for 2dfsA was found.
    2 View Details [335..423] PSI-BLAST 12.0 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle